Main Neurospaces logo neurospaces 0.1675 Thu, 27 Dec 2007 15:58:18 -0600 hugo

Index of group ./specifications/symboloperations

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operations on components in the symbol table

Because delete operations are only supported at the forestspace level, delete operations on nested data structures do not make much sense. Not tested.
1. Deletions of components of a simple neuron model

1. Deletions of components of a simple neuron model

Startup command : ./neurospacesparse -v 1 -q -R legacy/cells/golgi.ndf

1.1. Is neurospaces startup successful ?

1. Part of expected output 
./neurospacesparse: No errors for .+?/cells/golgi.ndf.

1.2. Do we find all the components in the golgi cell ?

1. Executed command
expand /**
2. Part of expected output 
/Golgi
- /Golgi/Golgi_soma
- /Golgi/Golgi_soma/spikegen
- /Golgi/Golgi_soma/Ca_pool
- /Golgi/Golgi_soma/CaHVA
- /Golgi/Golgi_soma/H
- /Golgi/Golgi_soma/InNa
- /Golgi/Golgi_soma/KA
- /Golgi/Golgi_soma/KDr
- /Golgi/Golgi_soma/Moczyd_KC
- /Golgi/Golgi_soma/mf_AMPA
- /Golgi/Golgi_soma/mf_AMPA/synapse
- /Golgi/Golgi_soma/mf_AMPA/exp2
- /Golgi/Golgi_soma/pf_AMPA
- /Golgi/Golgi_soma/pf_AMPA/synapse
- /Golgi/Golgi_soma/pf_AMPA/exp2

1.3. What is the serial mapping of the spikegen (1) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/spikegen
2. Part of expected output 
Traversal serial ID = 3
Principal serial ID = 3 of 16 Principal successors

1.4. What is the reverse serial mapping of the spikegen (1) ?

1. Executed command
serial2context / 3
2. Part of expected output 
serial id /,3 -> /Golgi/Golgi_soma/spikegen

1.5. What is the serial mapping of the InNa channel (1) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/InNa
2. Part of expected output 
Traversal serial ID = 7
Principal serial ID = 7 of 16 Principal successors

1.6. What is the reverse serial mapping of the InNa channel (1) ?

1. Executed command
serial2context / 7
2. Part of expected output 
serial id /,7 -> /Golgi/Golgi_soma/InNa

1.7. What is the serial mapping of the parallel fiber exponential equation (1) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/pf_AMPA/exp2
2. Part of expected output 
Traversal serial ID = 16
Principal serial ID = 16 of 16 Principal successors

1.8. What is the reverse serial mapping of the parallel fiber exponential equation (1) ?

1. Executed command
serial2context / 16
2. Part of expected output 
serial id /,16 -> /Golgi/Golgi_soma/pf_AMPA/exp2

1.9. Can we delete a channel ?

1. Executed command
delete /Golgi/Golgi_soma/H
2. Part of expected output 
neurospaces

1.10. Do we find all the remaining components in the golgi cell (1) ?

1. Executed command
expand /**
2. Part of expected output 
/Golgi
- /Golgi/Golgi_soma
- /Golgi/Golgi_soma/spikegen
- /Golgi/Golgi_soma/Ca_pool
- /Golgi/Golgi_soma/CaHVA
- /Golgi/Golgi_soma/InNa
- /Golgi/Golgi_soma/KA
- /Golgi/Golgi_soma/KDr
- /Golgi/Golgi_soma/Moczyd_KC
- /Golgi/Golgi_soma/mf_AMPA
- /Golgi/Golgi_soma/mf_AMPA/synapse
- /Golgi/Golgi_soma/mf_AMPA/exp2
- /Golgi/Golgi_soma/pf_AMPA
- /Golgi/Golgi_soma/pf_AMPA/synapse
- /Golgi/Golgi_soma/pf_AMPA/exp2

1.11. What is the serial mapping of the spikegen (2) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/spikegen
2. Part of expected output 
Traversal serial ID = 3
Principal serial ID = 3 of 15 Principal successors

1.12. What is the reverse serial mapping of the spikegen (2) ?

1. Executed command
serial2context / 3
2. Part of expected output 
serial id /,3 -> /Golgi/Golgi_soma/spikegen

1.13. What is the serial mapping of the InNa channel (2) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/InNa
2. Part of expected output 
Traversal serial ID = 6
Principal serial ID = 6 of 15 Principal successors

1.14. What is the reverse serial mapping of the InNa channel (2) ?

1. Executed command
serial2context / 6
2. Part of expected output 
serial id /,6 -> /Golgi/Golgi_soma/InNa

1.15. What is the serial mapping of the parallel fiber exponential equation (2) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/pf_AMPA/exp2
2. Part of expected output 
Traversal serial ID = 15
Principal serial ID = 15 of 15 Principal successors

1.16. What is the reverse serial mapping of the parallel fiber exponential equation (2) ?

1. Executed command
serial2context / 15
2. Part of expected output 
serial id /,15 -> /Golgi/Golgi_soma/pf_AMPA/exp2

1.17. Can we delete a synapse ?

1. Executed command
delete /Golgi/Golgi_soma/pf_AMPA/synapse
2. Part of expected output 
neurospaces
3. Comment
note that the deletions takes place at forestspace level, not treespace level

1.18. Do we find all the remaining components in the golgi cell (2) ?

1. Executed command
expand /**
2. Part of expected output 
/Golgi
- /Golgi/Golgi_soma
- /Golgi/Golgi_soma/spikegen
- /Golgi/Golgi_soma/Ca_pool
- /Golgi/Golgi_soma/CaHVA
- /Golgi/Golgi_soma/InNa
- /Golgi/Golgi_soma/KA
- /Golgi/Golgi_soma/KDr
- /Golgi/Golgi_soma/Moczyd_KC
- /Golgi/Golgi_soma/mf_AMPA
- /Golgi/Golgi_soma/mf_AMPA/exp2
- /Golgi/Golgi_soma/pf_AMPA
- /Golgi/Golgi_soma/pf_AMPA/exp2
3. Comment
note that the deletions takes place at forestspace level, not treespace level

1.19. What is the serial mapping of the spikegen (3) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/spikegen
2. Part of expected output 
Traversal serial ID = 3
Principal serial ID = 3 of 13 Principal successors

1.20. What is the reverse serial mapping of the spikegen (3) ?

1. Executed command
serial2context / 3
2. Part of expected output 
serial id /,3 -> /Golgi/Golgi_soma/spikegen

1.21. What is the serial mapping of the InNa channel (3) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/InNa
2. Part of expected output 
Traversal serial ID = 6
Principal serial ID = 6 of 13 Principal successors

1.22. What is the reverse serial mapping of the InNa channel (3) ?

1. Executed command
serial2context / 6
2. Part of expected output 
serial id /,6 -> /Golgi/Golgi_soma/InNa

1.23. What is the serial mapping of the parallel fiber exponential equation (3) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/pf_AMPA/exp2
2. Part of expected output 
Traversal serial ID = 13
Principal serial ID = 13 of 13 Principal successors

1.24. What is the reverse serial mapping of the parallel fiber exponential equation (3) ?

1. Executed command
serial2context / 13
2. Part of expected output 
serial id /,13 -> /Golgi/Golgi_soma/pf_AMPA/exp2

1.25. Can we delete a concentration pool ?

1. Executed command
delete /Golgi/Golgi_soma/Ca_pool
2. Part of expected output 
neurospaces
3. Comment
note that the deletions takes place at forestspace level, not treespace level

1.26. Do we find all the remaining components in the golgi cell (3) ?

1. Executed command
expand /**
2. Part of expected output 
/Golgi
- /Golgi/Golgi_soma
- /Golgi/Golgi_soma/spikegen
- /Golgi/Golgi_soma/CaHVA
- /Golgi/Golgi_soma/InNa
- /Golgi/Golgi_soma/KA
- /Golgi/Golgi_soma/KDr
- /Golgi/Golgi_soma/Moczyd_KC
- /Golgi/Golgi_soma/mf_AMPA
- /Golgi/Golgi_soma/mf_AMPA/exp2
- /Golgi/Golgi_soma/pf_AMPA
- /Golgi/Golgi_soma/pf_AMPA/exp2
3. Comment
note that the deletions takes place at forestspace level, not treespace level

1.27. What is the serial mapping of the spikegen (4) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/spikegen
2. Part of expected output 
Traversal serial ID = 3
Principal serial ID = 3 of 12 Principal successors

1.28. What is the reverse serial mapping of the spikegen (4) ?

1. Executed command
serial2context / 3
2. Part of expected output 
serial id /,3 -> /Golgi/Golgi_soma/spikegen

1.29. What is the serial mapping of the InNa channel (4) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/InNa
2. Part of expected output 
Traversal serial ID = 5
Principal serial ID = 5 of 12 Principal successors

1.30. What is the reverse serial mapping of the InNa channel (4) ?

1. Executed command
serial2context / 5
2. Part of expected output 
serial id /,5 -> /Golgi/Golgi_soma/InNa

1.31. What is the serial mapping of the parallel fiber exponential equation (4) ?

1. Executed command
serialMapping / /Golgi/Golgi_soma/pf_AMPA/exp2
2. Part of expected output 
Traversal serial ID = 12
Principal serial ID = 12 of 12 Principal successors

1.32. What is the reverse serial mapping of the parallel fiber exponential equation (4) ?

1. Executed command
serial2context / 12
2. Part of expected output 
serial id /,12 -> /Golgi/Golgi_soma/pf_AMPA/exp2

1.33. Can we delete the soma ?

1. Executed command
delete /Golgi/Golgi_soma
2. Part of expected output 
neurospaces

1.34. Do we find all the remaining components in the golgi cell (4) ?

1. Executed command
expand /**
2. Part of expected output 
/Golgi

1.35. Can we delete the cell ?

1. Executed command
delete /Golgi
2. Part of expected output 
neurospaces

1.36. Do we find an empty result ?

1. Executed command
expand /**
2. Part of expected output 
neurospaces