Main Neurospaces logo neurospaces 0.1675 Thu, 27 Dec 2007 15:58:18 -0600 hugo

Index of group ./specifications/gatetables


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parameters related to gates with tables

1. Gate table entries
2. Gate table start, end and step parameters

1. Gate table entries

Startup command : ./neurospacesparse -v 1 -q -R tests/cells/hardcoded_tables1.ndf


1.1. Is neurospaces startup successful ?

1. Part of expected output
./neurospacesparse: No errors for .+?/tests/cells/hardcoded_tables1.ndf.

1.2. Is the number of table entries of the first gate, first gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h1 HH_NUMBER_OF_TABLE_ENTRIES
2. Part of expected output
value = 10

1.3. Is the number of table entries of the first gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h2 HH_NUMBER_OF_TABLE_ENTRIES
2. Part of expected output
value = 10

1.4. Is the number of table entries of the first gate derived correctly ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh HH_NUMBER_OF_TABLE_ENTRIES
2. Part of expected output
value = 10

1.5. Is the number of table entries of the second gate, first gate kinetic correct (not found) ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h1 HH_NUMBER_OF_TABLE_ENTRIES
2. Part of expected output
parameter not found in symbol

1.6. Is the number of table entries of the second gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h2 HH_NUMBER_OF_TABLE_ENTRIES
2. Part of expected output
value = 8

1.7. Is the number of table entries of the second gate derived correctly ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2 HH_NUMBER_OF_TABLE_ENTRIES
2. Part of expected output
value = 1.79769e+308
3. Comment
These semantics are ok for running simulations, for modeling not sure yet.

2. Gate table start, end and step parameters

Startup command : ./neurospacesparse -v 1 -q -R tests/cells/hardcoded_tables1.ndf


2.1. Is neurospaces startup successful ?

1. Part of expected output
./neurospacesparse: No errors for .+?/tests/cells/hardcoded_tables1.ndf.

2.2. Is the start of the table of the first gate, first gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h1 HH_TABLE_START_Y
2. Part of expected output
value = 10

2.3. Is the end of the table of the first gate, first gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h1 HH_TABLE_END_Y
2. Part of expected output
value = 19

2.4. Is the step of the table of the first gate, first gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h1 HH_TABLE_STEP_Y
2. Part of expected output
value = 1

2.5. Is the start of the table of the first gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h2 HH_TABLE_START_Y
2. Part of expected output
value = 21

2.6. Is the end of the table of the first gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h2 HH_TABLE_END_Y
2. Part of expected output
value = 30

2.7. Is the step of the table of the first gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh/h2 HH_TABLE_STEP_Y
2. Part of expected output
value = 1

2.8. Is the start of the table of the first gate correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh HH_TABLE_START_Y
2. Part of expected output
value = 1.79769e+308

2.9. Is the end of the table of the first gate correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh HH_TABLE_END_Y
2. Part of expected output
value = 1.79769e+308

2.10. Is the step of the table of the first gate correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh HH_TABLE_STEP_Y
2. Part of expected output
value = 1

2.11. Is the start of the table of the second gate, first gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h1 HH_TABLE_START_Y
2. Part of expected output
parameter not found in symbol

2.12. Is the end of the table of the second gate, first gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h1 HH_TABLE_END_Y
2. Part of expected output
parameter not found in symbol
3. Comment
If the start cannot be found, the model container does not know how to find the end either

2.13. Is the step of the table of the second gate, first gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h1 HH_TABLE_STEP_Y
2. Part of expected output
parameter not found in symbol
3. Comment
If the start cannot be found, the model container does not know how to find the step either

2.14. Is the start of the table of the second gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h2 HH_TABLE_START_Y
2. Part of expected output
value = 42

2.15. Is the end of the table of the second gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h2 HH_TABLE_END_Y
2. Part of expected output
value = 49

2.16. Is the step of the table of the second gate, second gate kinetic correct ?

1. Executed command
printparameter /hardcoded_tables1/segments/soma/kh/kh2/h2 HH_TABLE_STEP_Y
2. Part of expected output
value = 1