Index of group ./specifications/addressing


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internal and external addressing of variables

1. Addressing variables for a simplified version of a purkinje segment
2. Addressing synchan activation

1. Addressing variables for a simplified version of a purkinje segment

Startup command : tests/code/addressing-purk-test-segment

(No model has been loaded for the following set of commands.)

1.1. Are the variables in an simplified version of a purkinje segment segment addressed correctly ?

1. Expected output
Initiated
Heccer (pcName) : (unnamed test)
Heccer (iStatus) : (20)
Heccer (iErrorCount) : (0)
Heccer Options (iOptions) : (0)
Heccer Options (dIntervalStart) : (-0.1)
Heccer Options (dIntervalEnd) : (0.05)
Heccer Options (dConcentrationGateStart) : (4e-05)
Heccer Options (dConcentrationGateEnd) : (0.3)
Heccer Options (iIntervalEntries) : (3000)
Heccer Options (iSmallTableSize) : (149)
Heccer (dTime) : (0)
Heccer (dStep) : (2e-05)
Compartment (mc.iType) : (1)
Tables (iTabulatedGateCount) : (7)
Compartment operations
-----
00000 :: FINISH
00001 :: FINISH
Mechanism operations
-----
00000 :: COMPARTMENT							 -2.23189e-10 0 218562 1.00061
00001 :: INITIALIZECHANNEL 0.137526 1.39493e-08
00002 :: LOADVOLTAGETABLE
00003 :: CONCEPTGATE 0 1 (nil)							 0.0394782
00004 :: CONCEPTGATE 1 1 (nil)							 0.0821138
00005 :: UPDATECOMPARTMENTCURRENT
00006 :: INITIALIZECHANNEL -0.085 1.67392e-05
00007 :: LOADVOLTAGETABLE
00008 :: CONCEPTGATE 2 2 (nil)							 0.00359944
00009 :: CONCEPTGATE 3 1 (nil)							 0.99998
00010 :: UPDATECOMPARTMENTCURRENT
00011 :: INITIALIZECHANNEL 0.045 2.78986e-08
00012 :: LOADVOLTAGETABLE
00013 :: CONCEPTGATE 4 3 (nil)							 0.761231
00014 :: UPDATECOMPARTMENTCURRENT
00015 :: INITIALIZECHANNEL 0.045 0.000209239
00016 :: LOADVOLTAGETABLE
00017 :: CONCEPTGATE 5 3 (nil)							 0.00784064
00018 :: CONCEPTGATE 6 1 (nil)							 0.263978
00019 :: UPDATECOMPARTMENTCURRENT
00020 :: FINISH
VM Diagonals (pdDiagonals[0]) : (1.00061)
VM Axial Resistances (pdResults[0]) : (0)
VM Axial Resistances (pdResults[1]) : (0)
VM Membrane Potentials (pdVms[0]) : (-0.068)
Membrane potential is -0.068
CaT state m is 0.0394782
CaT state h is 0.0821138
Kdr state m is 0.00359944
Kdr state h is 0.99998
NaP state n is 0.761231
NaF state m is 0.00784064
NaF state h is 0.263978

2. Addressing synchan activation

Startup command : tests/code/addressing-synchan

(No model has been loaded for the following set of commands.)

2.1. Is synchan activation addressed correctly ?

1. Expected output

0 0
1 0
2 0
3 0
4 0
5 0
6 0
7 0
8 0
9 0
10 0.970462
11 0.951245
12 0.932409
13 0.913946
14 0.895849
15 0.87811
16 0.860722
17 0.843679
18 0.826973
19 0.810598
20 0.794547
21 0.778814
22 0.763392
23 0.748276
24 0.733459
25 0.718936
26 0.7047
27 0.690746
28 0.677068
29 0.663661