Cross References

I

A B C D E F G H I J K L M 
N O P Q R S T U V W X Y Z + 



macro IA1

random.c:   *30    51    53    56    62



macro IA2

random.c:   *34    57    63



macro IA3

random.c:   *38    64



macro IC1

random.c:   *31    50    51    53    56    62



macro IC2

random.c:   *35    57    63



macro IC3

random.c:   *39    64



macro IDENTIFIER_CHILD

namespace.h:      *64



macro IDENTIFIER_CHILD_CHAR

namespace.h:      *65



macro IDENTIFIER_CHILD_STRING

namespace.h:      *66



macro IDENTIFIER_DEREFERENCE

namespace.h:      *52



macro IDENTIFIER_DEREFERENCE_CHAR

namespace.h:      *53



macro IDENTIFIER_DEREFERENCE_STRING

namespace.h:      *54



macro IDENTIFIER_IOSELECT

namespace.h:      *58



macro IDENTIFIER_IOSELECT_CHAR

namespace.h:      *59



macro IDENTIFIER_IOSELECT_STRING

namespace.h:      *60



macro IDENTIFIER_NAMESPACE

namespace.h:      *45



macro IDENTIFIER_NAMESPACE_CHAR

namespace.h:      *46



macro IDENTIFIER_NAMESPACE_STRING

namespace.h:      *47



macro IDENTIFIER_SYMBOL_CURRENT

namespace.h:      *38



macro IDENTIFIER_SYMBOL_CURRENT_CHAR

namespace.h:      *39



macro IDENTIFIER_SYMBOL_CURRENT_STRING

namespace.h:      *40



macro IDENTIFIER_SYMBOL_PARENT

namespace.h:      *31



macro IDENTIFIER_SYMBOL_PARENT_CHAR

namespace.h:      *32



macro IDENTIFIER_SYMBOL_PARENT_STRING

namespace.h:      *33



macro IDIN_H

idin.h:     *22



macro IMPORTEDFILE_FLAG_ROOT

importedfile.h:   *58



macro IMPORTEDFILE_H

importedfile.h:   *23



macro INPUTOUTPUT_H

inputoutput.h:    *22



macro INPUT_TYPE_INPUT

inputoutput.h:    *69



macro INPUT_TYPE_OUTPUT

inputoutput.h:    *73



INT2PTR

swiggable_heccer_wrap.c:      +907



macro INT_MAX

addressing.c:      414+  431   471
heccer.c:    115
limits.h:   *74
mechanism.c:       1461  1465  2011
mechanisms.c:      281   395   444   675   718   767   908   1078  1134  3030  3127
pidinstack.h:      645   679
segments.c:  173



macro INT_MIN

limits.h:   *72



macro IOCONTAINER_H

iocontainer.h:    *26



IOContainerAssignRelations

iocontainer.h:    +113  *149
iol.h:      +136   144



IOContainerCalloc

iocontainer.h:    +80    217



IOContainerCountIOs

iocontainer.h:    +82



IOContainerGetRelations

iocontainer.h:    +120  *164   194



IOContainerHasRelation

iocontainer.h:    +126  *178
iol.h:      +158   165



IOContainerInit

iocontainer.h:    +84



IOContainerIterateRelations

iocontainer.h:    +132  *192



IOContainerLookupRelation

iocontainer.h:    +87    180
iol.h:       178



IOContainerNewFromIO

iocontainer.h:    +138  *215



macro IOContainerNextRelation

iocontainer.h:    *64



IOContainerResolve

iocontainer.h:    +91
iol.h:       191



IOContainerResolvePosition

iocontainer.h:    +98



macro IOHContainer

iohier.h:   *45    71    94
vtable.h:    50



macro IOHContainerIterate

iohier.h:   *47



macro IOHIER_H

iohier.h:   *26



IOHierarchyAddChild

iohier.h:   +81



IOHierarchyGetChildren

iohier.h:   +95



IOHierarchyInit

iohier.h:   +98



IOHierarchyLookupHierarchical

iohier.h:   +101



IOHierarchyPrint

iohier.h:   +107



IOHierarchyTraverse

iohier.h:   +112



macro IOL_H

iol.h:      *26



IOListAssignBindableIO

iol.h:      +80   *119



IOListAssignInputs

iol.h:      +85   *141



IOListCalloc

iol.h:      +101



IOListGetInputs

iol.h:      +104



IOListHasBindableIO

iol.h:      +90   *162



IOListInit

iol.h:      +107



IOListLookupBindableIO

iol.h:      *175



IOListResolveInput

iol.h:      +95   *188



ITIMER_PROF

time.h:     *101



macro ITIMER_PROF

time.h:     *102



ITIMER_REAL

time.h:     *94



macro ITIMER_REAL

time.h:     *95



ITIMER_VIRTUAL

time.h:     *97



macro ITIMER_VIRTUAL

time.h:     *98



IdinCalloc

idin.h:     +200



IdinCallocUnique

idin.h:     +202



IdinCreateAlias

idin.h:     +205



IdinDuplicate

idin.h:     +208



IdinEqual

idin.h:     +227  *287



IdinFree

idin.h:     +232  *311



IdinFullName

idin.h:     +211



IdinGetFlag

idin.h:     +237  *324   348   368   427   505   518



IdinIsField

idin.h:     +242  *340



IdinIsNamespaced

idin.h:     +247  *360
pidinstack.h:      518



IdinIsPrintable

idin.h:     +252   294   295   342   362  *380   465   466



IdinIsRecursive

idin.h:     *405   460



IdinIsRooted

idin.h:     +257  *425



IdinIsWildCard

idin.h:     +262  *438



IdinMatch

idin.h:     +267  *451



IdinName

algorithmsymbol.h:       223
biocomp.h:   357
idin.h:     +215
parameters.h:      281



IdinNewFromChars

idin.h:     +217



IdinPointsToCurrent

idin.h:     +272  *503



IdinPointsToParent

idin.h:     +277  *516



IdinPrint

idin.h:     +219



macro IdinSetFlags

idin.h:     *147



macro IdinSetIndex

idin.h:     *158



macro IdinSetName

idin.h:     *169



macro IdinSetNamespaced

idin.h:     *180



macro IdinSetRooted

idin.h:     *191



class ImportedFile

heccer.c:    86
importedfile.h:   *35    120   125   130   132   136   140   142   146   149   154
       156
parsersupport.h:   86    306   369
symbols.h:  +71    79    94



ImportedFileCalloc

importedfile.h:   +120



ImportedFileClearRootImport

importedfile.h:   +122



ImportedFileFindDependencyFile

importedfile.h:   +125



ImportedFileGetBaseRootSymbol

importedfile.h:   +127



macro ImportedFileGetDefinedSymbols

importedfile.h:   *76



macro ImportedFileGetFilename

importedfile.h:   *87



ImportedFileGetRootImport

importedfile.h:   +132



ImportedFileGetRootSymbol

importedfile.h:   +130



ImportedFileLookupHierarchical

importedfile.h:   +135



ImportedFileLookupNameSpace

importedfile.h:   +141



ImportedFilePrint

importedfile.h:   +146



ImportedFilePrintNameSpaces

importedfile.h:   +148



ImportedFilePrintProperties

importedfile.h:   +153



ImportedFilePrintRootImport

importedfile.h:   +151



macro ImportedFileSetDefinedSymbols

importedfile.h:   *98



macro ImportedFileSetFilename

importedfile.h:   *110



ImportedFileSetRootImport

heccer.c:    95
importedfile.h:   +156



class Indexers

heccer.h:    216
indexers.c:  42
indexers.h: +26   *42    57
swiggable_heccer_wrap.c:       6593  6606  6626  6641+       6642



InputOutputFieldName

inputoutput.h:    +81



InputOutputInit

inputoutput.h:    +83



InputOutputNewForType

inputoutput.h:    +85



InputOutputResolve

inputoutput.h:    +88



macro InstanceOfMechanism

symboltable.h:    *208



macro InstanceOfMovable

symboltable.h:    *201



class Intermediary

addressing-aggregator1.c:      942
addressing-purk-test-axon.c:   888
c1c2p1.c:    131
c1c2p2.c:    131
callout1.c:  149
calloutInjector.c:       164
cbc.c:      +18
channel1-nernst1.c:      387
channel2-nernst1.c:      593
channel2-nernst2.c:      621
check-compartment.c:     694
doublea-aggregator.c:    771
doublep.c:   131
fork3p.c:    180
fork4p1.c:   229
fork4p2.c:   229
fork4p3.c:   229
heccer.c:    899
heccer.h:    212   327
hh1.c:       443
intermediary.c:    268
intermediary.h:   +26   *44    84
mechanisms.c:      3671
perfectclamp-passive1.c:       94
perfectclamp-passive10-2.c:    708
perfectclamp-passive10.c:      708
pool1-contributors2.c:   564
pool1-feedback1.c:       506
pool1-feedback2.c:       506
pool1-nernst.c:    386
pool1.c:     358
pool2.c:     651
segments.c:  64    264   311   380
singlea-naf-current.c:   316
singlea-naf.c:     317
singlea-naf2-aggregator.c:     588
singlep.c:   84
spiker1.c:   482
spiker2.c:   507   687   867
spiker3.c:   507   687   867
springmass1.c:     219
springmass2.c:     219
springmass3.c:     212
springmass4.c:     212
swiggable_heccer_wrap.c:       5009+       5036+       5063+       5094+       5121+
       5152+       5179+       5210+       5237+       5264+       5291+       5318+
       5345  5352+       5366+       5418+       6535+       6566  6578  7285+
table-cap.c:       311
table-cat.c:       311
table-dual-kdr.c:  533
table-dual-km.c:   353
table-k2.c:  257
table-ka.c:  311
table-kc.c:  257
table-kdr.c:       294
table-kdr2.c:      225
table-kh.c:  215
table-km.c:  204
table-naf.c:       311
table-nap.c:       224
tensizesp.c:       694
triplep.c:   180
vclamp-passive.c:  94
vclamp-sodium.c:   319



class InternalNernst

channel1-nernst1.c:      298   425+
channel2-nernst1.c:      541   641+
channel2-nernst2.c:      298   532   663+  671+
intermediary.c:    123+
mathcomponent.c:   37+
mechanism.c:       572+
mechanism.h:      *202
mechanisms.c:      2692+       3940+
pool1-nernst.c:    334   428+
swiggable_heccer_wrap.c:       10038+      10069+      10096+      10124+      10151+
       10178+      10205+      10233+      10260+      10288+      10315       10322+
       10336+



class InternalResults

callout.h:  *58    89    109
callout1.c:  76    167
calloutInjector.c:       76    182
mechanism.c:       2364
swiggable_heccer_wrap.c:       2046+       2074+       2101  2108+       2122+
       2420+       2451  2463



iCreatedAliases

symboltable.h:    +691  +709   713  +727  .736   738



iINT_MAX

parameters.h:     +34



iTarget

eventdistributor.c:     *733  ,763   769



iTotalAllocatedSymbols

symbolvirtual_protos.h: +38



typedef id_t

types.h:    *105



ilogb

mathcalls.h:      +297



ilogbf

mathcalls.h:      +297



ilogbl

mathcalls.h:      +297



inCa

channel1-nernst1.c:     *298   413   427
channel2-nernst1.c:     *541   621   643
pool1-nernst.c:   *334   412   430



inCa1

channel2-nernst2.c:     *298   649   665



inCa2

channel2-nernst2.c:     *532   651   673



(#include) wordsize.h

types.h:     28
wordsize.h: *1



(#include) wchar.h

_G_config.h:       24
gconv.h:     28
wchar.h:    *1



(#include) wchar.h

wchar.h:     50
wchar.h:    *1



(#include) vtable.h

symbolvirtual_protos.h:  135
vtable.h:   *1



(#include) vm.h

heccer.h:    34
vm.c:  22
vm.h: *1



(#include) vclamp.h

vclamp-passive.c:  23
vclamp-sodium.c:   23
vclamp.c:    25
vclamp.h:   *1



(#include) unistd.h

neurospaces.h:     33
unistd.h:   *1



(#include) types.h

stdlib.h:    433
types.h:    *1



(#include) typesizes.h

types.h:     129
typesizes.h:      *1



(#include) types.h

_G_config.h:       9
select.h:    28
stdio.h:     36
time.h:      39    65
time.h:      24
time.h:      56    72    89    101
types.h:     31
types.h:    *1
unistd.h:    186



(#include) treespacetraversal.h

algorithmsymbol.h:       37
iohier.h:    75
mechanisms.c:      28
segments.c:  23
symbolvirtual_protos.h:  134
treespacetraversal.h:   *1



(#include) time.h

random.h:    19
select.h:    44
time.h:      26
time.h:     *1
types.h:     133



(#include) time.h

neurospaces.h:     32
time.h:     *1



(#include) time.h

select.h:    46
time.h:     *1
time.h:      28
time.h:      42



(#include) table.h

heccer.h:    33
mechanism.h:       26
swiggable_heccer_wrap.c:       1112
table.c:     25
table.h:    *1



(#include) sysmacros.h

sysmacros.h:      *1
types.h:     219



(#include) syslimits.h

limits.h:    11
syslimits.h:      *1



(#include) sys_errlist.h

stdio.h:     747
sys_errlist.h:    *1



(#include) symbolvirtual_protos.h

algorithmsymbol.h:       148
pidinstack.h:      386
symbolvirtual_protos.h: *1



(#include) symboltable.h

algorithminstance.h:     52
algorithmsymbol.h:       63
attachment.h:      97
defsym.h:    84
iol.h:       30
parsersupport.h:   40
psymbolserialstack.h:    218
psymbolstack.h:    244
solvermapper.h:    31
symbols.h:   40
symboltable.h:    *1
symbolvirtual_protos.h:  30



(#include) symbols.h

neurospaces.h:     42
symbols.h:  *1



(#include) stubs.h

features.h:  331
stubs.h:    *1



(#include) strings.h

addressing.c:      23
mechanisms.c:      22
strings.h:  *1



(#include) string.h

addressing.c:      22
compartment.c:     21
heccer.c:    24
idin.h:      35
mathcomponent.c:   21
mechanism.c:       24
mechanisms.c:      21
output.c:    21
perfectclamp.c:    22
string.h:   *1
swiggable_heccer_wrap.c:       116   529
table.c:     22
table.h:     23
vclamp.c:    22
vm.c:  19



(#include) stdlib.h

addressing-aggregator1.c:      20
addressing-purk-test-axon.c:   20
addressing.c:      21
channel1-nernst1.c:      19
channel2-nernst1.c:      19
channel2-nernst2.c:      19
compartment.c:     20
doublea-aggregator.c:    19
eventdistributor.c:      20
heccer.c:    22
hh1.c:       19
idin.h:      34
intermediary.c:    19
main.c:      20
mathcomponent.c:   20
mechanism.c:       23
mechanisms.c:      20
minimumdegree.c:   19
neurospaces.h:     30
output.c:    20
parsersupport.h:   29
perfectclamp-passive1.c:       19
perfectclamp-passive10-2.c:    19
perfectclamp-passive10.c:      19
perfectclamp.c:    21
pidinstack.h:      45
pool1-contributors2.c:   19
pool1-feedback1.c:       19
pool1-feedback2.c:       19
pool1-nernst.c:    19
pool1.c:     19
pool2.c:     19
segments.c:  20
singlea-naf2-aggregator.c:     19
spiker1.c:   19
spiker2.c:   19
spiker3.c:   19
springmass1.c:     20
springmass2.c:     20
springmass3.c:     20
springmass4.c:     20
stdlib.h:   *1
swiggable_heccer_wrap.c:       614
symbols.h:   29
symbolvirtual_protos.h:  130
table-cap.c:       19
table-cat.c:       19
table-k2.c:  19
table-kc.c:  19
table.c:     21
vclamp-passive.c:  19
vclamp-sodium.c:   19
vclamp.c:    21
version.c:   19



(#include) stdio_lim.h

stdio.h:     138
stdio_lim.h:      *1



(#include) stdio.h

addressing.c:      20
addressing.h:      23
algorithmclass.h:  29
algorithminstance.h:     29
algorithmsymbol.h:       26
callout1.c:  19
calloutInjector.c:       19
compartment.c:     19
compartment.h:     23
defsym.h:    26
eventdistributor.c:      21
heccer.c:    23
heccer.h:    23
idin.h:      33
indexers.h:  23
intermediary.h:    23
iohier.h:    29
main.c:      19
mathcomponent.c:   19
mechanism.c:       22
mechanisms.c:      19
minimumdegree.h:   23
neurospaces.h:     29
output.c:    19
output.h:    23
parameters.h:      25
parcontainer.h:    25
parsersupport.h:   28
perfectclamp.c:    20
perfectclamp.h:    23
pidinstack.h:      44
random.c:    19
segments.c:  19
springmass1.c:     19
springmass2.c:     19
springmass3.c:     19
springmass4.c:     19
stdio.h:    *1
symbols.h:   28
table.c:     20
vclamp.c:    20
vclamp.h:    23
vm.h:  23



(#include) stddef.h

_G_config.h:       14
alloca.h:    25
gconv.h:     31
malloc.h:    44
stddef.h:   *1
stdio.h:     34
stdlib.h:    33
string.h:    33
time.h:      38
types.h:     147
types.h:     31
unistd.h:    195
wchar.h:     48



(#include) stdarg.h

heccer.c:    21
libio.h:     53
mechanism.c:       21
neurospaces.h:     28
stdarg.h:   *1



(#include) solvermapper.h

neurospaces.h:     41
solvermapper.h:   *1



(#include) sigset.h

select.h:    34
sigset.h:   *1



(#include) sglib.h

eventdistributor.c:      28
sglib.h:    *1



(#include) service.h

heccer.h:    32
mechanisms.c:      36
segments.c:  30
service.h:  *1



(#include) select.h

select.h:   *1
time.h:      30
types.h:     216



(#include) select.h

select.h:    31
select.h:   *1



(#include) segments.h

heccer.c:    25
segments.c:  29
segments.h: *1



(#include) sched.h

pthreadtypes.h:    23
sched.h:    *1



(#include) random.h

mechanism.c:       30
random.c:    21
random.h:   *1



(#include) pthreadtypes.h

pthreadtypes.h:   *1
types.h:     266



(#include) psymbolstack.h

pidinstack.h:      53
psymbolserialstack.h:    29
psymbolstack.h:   *1



(#include) psymbolserialstack.h

pidinstack.h:      54
psymbolserialstack.h:   *1



(#include) posix_opt.h

posix_opt.h:      *1
unistd.h:    171



(#include) posix2_lim.h

limits.h:    148
posix2_lim.h:     *1



(#include) posix1_lim.h

limits.h:    144
posix1_lim.h:     *1



(#include) positionD3.h

positionD3.h:     *1
symbolvirtual_protos.h:  29



(#include) pidinstack.h

biocomp.h:   81
function.h:  89
heccer.c:    21
importedfile.h:    117
inputoutput.h:     76
iohier.h:    55
mechanisms.c:      27
parsersupport.h:   39
pidinstack.h:     *1
psymbolserialstack.h:    217
psymbolstack.h:    243
segments.c:  22
solvermapper.h:    30
symbols.h:   39



(#include) perfectclamp.h

perfectclamp-passive1.c:       23
perfectclamp-passive10-2.c:    23
perfectclamp-passive10.c:      23
perfectclamp.c:    25
perfectclamp.h:   *1
swiggable_heccer_wrap.c:       1111



(#include) parsersupport.h

algorithminstance.h:     51
algorithmset.h:    61
heccer.c:    20
mechanisms.c:      26
neurospaces.h:     171
parsersupport.h:  *1



(#include) parcontainer.h

algorithmsymbol.h:       62
biocomp.h:   35
function.h:  26
parcontainer.h:   *1



(#include) parameters.h

attachment.h:      96
biocomp.h:   191
function.h:  25
parameters.h:     *1
parcontainer.h:    33
pidinstack.h:      249



(#include) output.h

eventdistributor.c:      24
hh1.c:       25
output.c:    24
output.h:   *1
spiker1.c:   24
spiker2.c:   25
spiker3.c:   25
springmass1.c:     25
springmass2.c:     25
springmass3.c:     25
springmass4.c:     25
swiggable_heccer_wrap.c:       1110



(#include) neurospaces.h

heccer.h:    25
heccer.h:    25
importedfile.h:    27
neurospaces.h:    *1
parsersupport.h:   35
solvermapper.h:    29
symbols.h:   37



(#include) namespace.h

namespace.h:      *1
pidinstack.h:      52
psymbolstack.h:    30



(#include) minimumdegree.h

indexers.h:  29
minimumdegree.c:   22
minimumdegree.h:  *1



(#include) mechanisms.h

mechanisms.c:      35
mechanisms.h:     *1



(#include) mechanism.h

intermediary.h:    31
mathcomponent.c:   24
mechanism.h:      *1
swiggable_heccer_wrap.c:       1109
table.h:     25
vm.h:  38



(#include) mathcomponent.h

addressing.c:      27
callout.h:   53
channel1-nernst1.c:      23
channel2-nernst1.c:      23
channel2-nernst2.c:      23
compartment.h:     26
hh1.c:       24
mathcomponent.c:   23
mathcomponent.h:  *1
mechanism.h:       25
mechanisms.c:      33
pool1-contributors2.c:   23
pool1-nernst.c:    23
pool1.c:     23
swiggable_heccer_wrap.c:       1108



(#include) math.h

math.h:     *1
mechanism.c:       20
perfectclamp.c:    19
table.c:     19
vclamp.c:    19



(#include) mathdef.h

math.h:      46
mathdef.h:  *1



(#include) mathcalls.h

math.h:      70    93    114
mathcalls.h:      *1



(#include) malloc.h

addressing-aggregator1.c:      19
addressing-purk-test-axon.c:   19
malloc.h:   *1



(#include) main.h

addressing-aggregator1.c:      27
addressing-purk-test-axon.c:   27
hh1.c:       467
main.c:      23
main.h:     *1
perfectclamp-passive1.c:       26
perfectclamp-passive10-2.c:    26
perfectclamp-passive10.c:      26
spiker1.c:   553
springmass1.c:     243
springmass2.c:     243
springmass3.c:     236
springmass4.c:     236
vclamp-passive.c:  26
vclamp-sodium.c:   26



(#include) main.c

addressing-aggregator1.c:      1077
addressing-purk-test-axon.c:   1089
c1c2p1.c:    149
c1c2p2.c:    149
callout1.c:  193
calloutInjector.c:       227
channel1-nernst1.c:      460
channel2-nernst1.c:      662
channel2-nernst2.c:      696
check-compartment.c:     712
doublea-aggregator.c:    836
doublep.c:   149
fork3p.c:    198
fork4p1.c:   247
fork4p2.c:   247
fork4p3.c:   247
hh1.c:       539
main.c:     *1
perfectclamp-passive1.c:       147
perfectclamp-passive10-2.c:    761
perfectclamp-passive10.c:      761
pool1-contributors2.c:   627
pool1-feedback1.c:       569
pool1-feedback2.c:       569
pool1-nernst.c:    449
pool1.c:     415
pool2.c:     716
singlea-naf-current.c:   334
singlea-naf.c:     335
singlea-naf2-aggregator.c:     645
singlep.c:   102
spiker1.c:   655
springmass1.c:     291
springmass2.c:     291
springmass3.c:     284
springmass4.c:     284
table-cap.c:       329
table-cat.c:       329
table-dual-kdr.c:  551
table-dual-km.c:   371
table-k2.c:  275
table-ka.c:  329
table-kc.c:  275
table-kdr.c:       312
table-kdr2.c:      243
table-kh.c:  233
table-km.c:  222
table-naf.c:       329
table-nap.c:       242
tensizesp.c:       712
triplep.c:   198
vclamp-passive.c:  159
vclamp-sodium.c:   384



(#include) local_lim.h

local_lim.h:      *1
posix1_lim.h:      153



(#include) limits.h

limits.h:   *1
syslimits.h:       7



(#include) limits.h

addressing.c:      19
biocomp.h:   30
limits.h:   *1
mechanism.c:       19
pidinstack.h:      43



(#include) limits.h

limits.h:   *1
local_lim.h:       36



(#include) limits.h

limits.h:   *1
limits.h:    122



(#include) libio.h

libio.h:    *1
stdio.h:     72



(#include) iol.h

iohier.h:    53
iol.h:      *1



(#include) iohier.h

biocomp.h:   33
iohier.h:   *1
vtable.h:    29



(#include) iocontainer.h

iocontainer.h:    *1
iol.h:       73    110



(#include) intermediary.h

heccer.h:    30
intermediary.c:    22
intermediary.h:   *1
mechanisms.c:      32
segments.c:  27
swiggable_heccer_wrap.c:       1106



(#include) inputoutput.h

attachment.h:      95
inputoutput.h:    *1
iocontainer.h:     104
symbolvirtual_protos.h:  153



(#include) indexers.h

heccer.h:    31
indexers.c:  19
indexers.h: *1



(#include) importedfile.h

heccer.c:    19
importedfile.h:   *1



(#include) idin.h

algorithmsymbol.h:       36
attachment.h:      75
idin.h:     *1
inputoutput.h:     26
parameters.h:      28
parsersupport.h:   38
pidinstack.h:      51
psymbolstack.h:    29
symbolvirtual_protos.h:  28



(#include) huge_val.h

huge_val.h: *1
math.h:      33



(#include) hines_listlist.h

hines_listlist.h: *1
parsersupport.h:   37



(#include) hines_list.h

algorithmclass.h:  38
algorithminstance.h:     92
algorithmset.h:    29
biocomp.h:   34
defsym.h:    28
hines_list.h:     *1
hines_listlist.h:  21
importedfile.h:    28
inputoutput.h:     25
iohier.h:    54
iol.h:       29
parsersupport.h:   36
symboltable.h:     41



(#include) heccer.h

heccer.c:    26
heccer.h:   *1
mechanisms.c:      34
segments.c:  28



(#include) heccer.h

heccer.h:   *1
swiggable_heccer_wrap.c:       1117



(#include) heccer.h

addressing-aggregator1.c:      24
addressing-purk-test-axon.c:   24
addressing.c:      26
c1c2p1.c:    20
c1c2p2.c:    20
callout.h:   52
callout1.c:  23
calloutInjector.c:       23
channel1-nernst1.c:      22
channel2-nernst1.c:      22
channel2-nernst2.c:      22
check-compartment.c:     20
compartment.c:     24
compartment.h:     25
doublea-aggregator.c:    23
doublep.c:   20
event.c:     20
event.h:     25
fork3p.c:    20
fork4p1.c:   20
fork4p2.c:   20
fork4p3.c:   20
heccer.c:    26
heccer.c:    24
heccer.h:   *1
hh1.c:       23
mechanism.c:       29
minimumdegree.c:   21
perfectclamp-passive1.c:       22
perfectclamp-passive10-2.c:    22
perfectclamp-passive10.c:      22
pool1-contributors2.c:   22
pool1-feedback1.c:       22
pool1-feedback2.c:       22
pool1-nernst.c:    22
pool1.c:     22
pool2.c:     22
singlea-naf-current.c:   20
singlea-naf.c:     20
singlea-naf2-aggregator.c:     23
singlep.c:   20
spiker1.c:   23
spiker2.c:   23
spiker3.c:   24
springmass1.c:     24
springmass2.c:     24
springmass3.c:     24
springmass4.c:     24
swiggable_heccer_wrap.c:       1107
table-cap.c:       22
table-cat.c:       22
table-dual-kdr.c:  20
table-dual-km.c:   20
table-k2.c:  22
table-ka.c:  20
table-kc.c:  22
table-kdr.c:       20
table-kdr2.c:      20
table-kh.c:  20
table-km.c:  20
table-naf.c:       20
table-nap.c:       20
table.c:     24
tensizesp.c:       20
triplep.c:   20
vclamp-passive.c:  22
vclamp-sodium.c:   22
version.c:   21
vm.c:  21



(#include) getopt.h

getopt.h:   *1
unistd.h:    783



(#include) gconv.h

_G_config.h:       44
gconv.h:    *1



(#include) function.h

function.h: *1
mechanisms.c:      25



(#include) float.h

algorithmsymbol.h:       25
biocomp.h:   29
eventdistributor.c:      19
float.h:    *1
mechanism.h:       23



(#include) features.h

alloca.h:    22
assert.h:    36
endian.h:    22
features.h: *1
gconv.h:     26
limits.h:    26
malloc.h:    23
math.h:      27
select.h:    25
stdio.h:     28
stdlib.h:    25
string.h:    26
sysmacros.h:       23
time.h:      22
time.h:      28
types.h:     27
types.h:     27
unistd.h:    26



(#include) eventdistributor.h

eventdistributor.c:      23
eventdistributor.h:     *1
heccer.h:    29
spiker1.c:   500
spiker2.c:   885
spiker3.c:   885
swiggable_heccer_wrap.c:       1105



(#include) event.h

event.c:     19
event.h:    *1
mechanism.c:       28
spiker2.c:   24
spiker3.c:   23



(#include) endian.h

endian.h:   *1
types.h:     213



(#include) endian.h

endian.h:   *1
endian.h:    37



(#include) double.h

double.h:   *1
parameters.h:      27
positionD3.h:      25



(#include) defsym.h

defsym.h:   *1
importedfile.h:    26



(#include) confname.h

confname.h: *1
unistd.h:    530



(#include) config.h

config.h:   *1
swiggable_heccer_wrap.c:       1101



(#include) compartment.h

addressing-aggregator1.c:      23
addressing-purk-test-axon.c:   23
c1c2p1.c:    19
c1c2p2.c:    19
callout1.c:  22
calloutInjector.c:       22
channel1-nernst1.c:      21
channel2-nernst1.c:      21
channel2-nernst2.c:      21
check-compartment.c:     19
compartment.c:     23
compartment.h:    *1
doublea-aggregator.c:    22
doublep.c:   19
fork3p.c:    19
fork4p1.c:   19
fork4p2.c:   19
fork4p3.c:   19
hh1.c:       22
intermediary.c:    21
intermediary.h:    30
mechanism.c:       27
mechanisms.c:      31
pool1-contributors2.c:   21
pool1-feedback1.c:       21
pool1-feedback2.c:       21
pool1-nernst.c:    21
pool1.c:     21
pool2.c:     21
segments.c:  26
singlea-naf-current.c:   19
singlea-naf.c:     19
singlea-naf2-aggregator.c:     22
singlep.c:   19
spiker1.c:   22
spiker2.c:   22
spiker3.c:   22
springmass1.c:     23
springmass2.c:     23
springmass3.c:     23
springmass4.c:     23
swiggable_heccer_wrap.c:       1104
table-cap.c:       21
table-cat.c:       21
table-dual-kdr.c:  19
table-dual-km.c:   19
table-k2.c:  21
table-ka.c:  19
table-kc.c:  21
table-kdr.c:       19
table-kdr2.c:      19
table-kh.c:  19
table-km.c:  19
table-naf.c:       19
table-nap.c:       19
tensizesp.c:       19
triplep.c:   19



(#include) cdefs.h

cdefs.h:    *1
features.h:  308



(#include) callout.h

callout.h:  *1
callout1.c:  21
calloutInjector.c:       21
swiggable_heccer_wrap.c:       1103
vm.h:  37



(#include) cacheregistry.h

cacheregistry.h:  *1
neurospaces.h:     40



(#include) biolevel.h

biolevel.h: *1
symbolvirtual_protos.h:  26



(#include) biocomp.h

attachment.h:      94
biocomp.h:  *1



(#include) attachment.h

attachment.h:     *1
mechanisms.c:      24



(#include) assert.h

assert.h:   *1
sglib.h:     21



(#include) alloca.h

alloca.h:   *1
stdlib.h:    606



(#include) algorithmsymbol.h

algorithmclass.h:  40
algorithmset.h:    60
algorithmsymbol.h:      *1
parsersupport.h:   241



(#include) algorithmset.h

algorithmset.h:   *1
symbols.h:   38



(#include) algorithminstance_vtable.h

algorithminstance.h:     94
algorithminstance_vtable.h:   *1



(#include) algorithminstance.h

algorithmclass.h:  39
algorithminstance.h:    *1
algorithmset.h:    59
algorithmsymbol.h:       35
parsersupport.h:   240
symbolvirtual_protos.h:  133



(#include) algorithmclass.h

algorithmclass.h: *1
algorithminstance.h:     93



(#include) addressing.h

addressing-aggregator1.c:      22
addressing-purk-test-axon.c:   22
addressing.c:      25
addressing.h:     *1
doublea-aggregator.c:    21
heccer.c:    23
hh1.c:       21
mechanism.c:       26
mechanisms.c:      30
perfectclamp-passive1.c:       21
perfectclamp-passive10-2.c:    21
perfectclamp-passive10.c:      21
segments.c:  25
singlea-naf2-aggregator.c:     21
spiker1.c:   21
spiker2.c:   21
spiker3.c:   21
springmass1.c:     22
springmass2.c:     22
springmass3.c:     22
springmass4.c:     22
swiggable_heccer_wrap.c:       1102
vclamp-passive.c:  21
vclamp-sodium.c:   21



(#include) _G_config.h

_G_config.h:      *1
libio.h:     32



index

string.h:   +303



initstate

stdlib.h:   +449



initstate_r

stdlib.h:   +479



typedef ino_t

types.h:    *50



instanceof_algorithm_symbol

mechanisms.c:     +2297 +3131



instanceof_attachment

mechanisms.c:     +1724 +2329 +3163



instanceof_cell

mechanisms.c:     +2232 +2274 +3110



instanceof_channel

mechanisms.c:     +2393 +2938 +3213



instanceof_concentration_gate_kinetic

mechanisms.c:     +883  +2319 +3153



instanceof_equation

mechanisms.c:     +1770 +2320 +3154



instanceof_gate_kinetic

mechanisms.c:     +408  +731  +1091 +1362 +1527 +1951 +2317 +3151



instanceof_group

mechanisms.c:     +2306 +3140



instanceof_h_h_gate

mechanisms.c:     +355  +633  +1034 +1305 +1490 +1889 +2318 +3152



instanceof_pool

mechanisms.c:     +2801 +3190



instanceof_segment

mechanisms.c:     +2245 +2307 +3141
segments.c: +58



instanceof_v_segment

mechanisms.c:     +2308 +3142



typedef int16_t

types.h:    *185



typedef int32_t

stdlib.h:    464   465   466   470   474
types.h:    *185



typedef int64_t

types.h:    *185



typedef int8_t

types.h:    *185



int_array

swiggable_heccer_wrap.c:      *1133  1504



int_destroy

swiggable_heccer_wrap.c:      *1137  1530



int_get

swiggable_heccer_wrap.c:      *1145  1587



int_set

swiggable_heccer_wrap.c:      *1141  1559



inter

addressing-aggregator1.c:     *942
addressing-purk-test-axon.c:  *888
c1c2p1.c:   *131
c1c2p2.c:   *131
callout1.c: *149
calloutInjector.c:      *164
channel1-nernst1.c:     *387
channel2-nernst1.c:     *593
channel2-nernst2.c:     *621
check-compartment.c:    *694
doublea-aggregator.c:   *771
doublep.c:  *131
fork3p.c:   *180
fork4p1.c:  *229
fork4p2.c:  *229
fork4p3.c:  *229
hh1.c:      *443
main.c:     .57+  .163
perfectclamp-passive1.c:      *94
perfectclamp-passive10-2.c:   *708
perfectclamp-passive10.c:     *708
pool1-contributors2.c:  *564
pool1-feedback1.c:      *506
pool1-feedback2.c:      *506
pool1-nernst.c:   *386
pool1.c:    *358
pool2.c:    *651
singlea-naf-current.c:  *316
singlea-naf.c:    *317
singlea-naf2-aggregator.c:    *588
singlep.c:  *84
spiker1.c:  .28+  *482
springmass1.c:    *219
springmass2.c:    *219
springmass3.c:    *212
springmass4.c:    *212
table-cap.c:      *311
table-cat.c:      *311
table-dual-kdr.c: *533
table-dual-km.c:  *353
table-k2.c: *257
table-ka.c: *311
table-kc.c: *257
table-kdr.c:      *294
table-kdr2.c:     *225
table-kh.c: *215
table-km.c: *204
table-naf.c:      *311
table-nap.c:      *224
tensizesp.c:      *694
triplep.c:  *180
vclamp-passive.c: *94
vclamp-sodium.c:  *319



interSource

spiker2.c:  *507  .1263+      .1371
spiker3.c:  *507  .1009+      .1313



interTarget1

spiker2.c:  *687  .1269+      .1384
spiker3.c:  *687  .1015+      .1326



interTarget2

spiker2.c:  *867  .1275+      .1397
spiker3.c:  *867  .1021+      .1339



typedef intptr_t

unistd.h:   *236   942



isGV

swiggable_heccer_wrap.c:      +755



isatty

unistd.h:   +717



isinf

mathcalls.h:      +202



isinff

mathcalls.h:      +202



isinfl

mathcalls.h:      +202



isnan

mathcalls.h:      +235



isnanf

mathcalls.h:      +235



isnanl

mathcalls.h:      +235



class itimerspec

time.h:     *159   362   363   366



class itimerval

time.h:     *107   126   132   133



iActivator
    
  s ConcentrationActivator		(9)

mechanism.c:       936
mechanism.h:      *780
mechanisms.c:     ,2619 ,2626  3907  3909 ,3911
swiggable_heccer_wrap.c:      ,17324       17350



iActivatorSet
    
  s HeccerOptions		(3)

heccer.h:   *67
swiggable_heccer_wrap.c:      ,5714  5740



iAggregators
    
  s VM		(7)

addressing.c:      135
heccer.c:    58    100
vm.c:  387
vm.h: *126  ,951+



iAllocationIdentifier
    
  s symtab_HSolveListElement		(1)

symboltable.h:    *130



iArgc
    
  s NeurospacesConfig		(1)

neurospaces.h:    *103



iAxres
    
  s VM		(3)

compartment.c:    ,360
vm.c:  351
vm.h: *70



iBiolevel_Atomic
    
  s BiolevelSelection		(1)

biolevel.h: *91



iBiolevel_Brain
    
  s BiolevelSelection		(1)

biolevel.h: *81



iBiolevel_Brain_Region
    
  s BiolevelSelection		(1)

biolevel.h: *83



iBiolevel_Brain_Structure
    
  s BiolevelSelection		(1)

biolevel.h: *82



iBiolevel_Cell
    
  s BiolevelSelection		(1)

biolevel.h: *87



iBiolevel_Chemical_Pathway
    
  s BiolevelSelection		(1)

biolevel.h: *89



iBiolevel_Mechanism
    
  s BiolevelSelection		(1)

biolevel.h: *88



iBiolevel_Molecular
    
  s BiolevelSelection		(1)

biolevel.h: *90



iBiolevel_Nervous_System
    
  s BiolevelSelection		(1)

biolevel.h: *80



iBiolevel_Network
    
  s BiolevelSelection		(1)

biolevel.h: *84



iBiolevel_Population
    
  s BiolevelSelection		(1)

biolevel.h: *85



iBiolevel_Subpopulation
    
  s BiolevelSelection		(1)

biolevel.h: *86



iChars
    
  s MathComponentInfo		(90)

addressing-aggregator1.c:      990+
addressing-purk-test-axon.c:   936+
channel1-nernst1.c:      415+  425   429
channel2-nernst1.c:      623+  633   637   641
channel2-nernst2.c:      653+  663   667   671   675
doublea-aggregator.c:    797+  807   811   815
hh1.c:       482+  492
mathcomponent.c:   90    226   289   392
mathcomponent.h:  *111
pool1-contributors2.c:   592+  602   606
pool1-feedback1.c:       534+  544   548
pool1-feedback2.c:       534+  544   548
pool1-nernst.c:    414+  424   428
pool1.c:     384+  394
pool2.c:     677+  687   691   695
singlea-naf2-aggregator.c:     614+  624
spiker1.c:   570+  580   584
spiker2.c:   1153+       1163  1167
spiker3.c:   924+  934   938
swiggable_heccer_wrap.c:      ,7918  7944



iClampsActive
    
x s PerfectClamp		(5)
    
x s VClamp		(3)
iClampsActive of PerfectClamp

perfectclamp.c:    53   .62
perfectclamp.h:   *34
swiggable_heccer_wrap.c:      ,18793       18819
iClampsActive of VClamp

vclamp.c:    54   .65
vclamp.h:   *34



iClasses
    
  s AlgorithmSet		(1)

algorithmset.h:   *44



iCommands
    
  s HeccerCommandTable		(5)

vm.c: *57   ,141   145   203   211



iCompartment
    
  s MathComponentData		(3)

mechanisms.c:     *59    2249 .2253



iCompartments
    
  s Intermediary		(29)

addressing.c:      279
compartment.c:     83    93    201   305   364   368   487   533
heccer.c:    154
intermediary.c:    274
intermediary.h:   *48
mechanism.c:       230   1562  3145
minimumdegree.c:   499   506   513
segments.c:  68   .199   207  ,266   315   331   349   382   386
swiggable_heccer_wrap.c:      ,5023  5049



iConnectionIndices
    
  s EventQueuerData		(11)

eventdistributor.c:     ,707   823   830   902   904   905  .907   982
eventdistributor.h:     *144
swiggable_heccer_wrap.c:      ,4227  4253



iConnections
    
  s EventDistributorData		(5)

eventdistributor.c:      241  ,335
eventdistributor.h:     *72
swiggable_heccer_wrap.c:      ,3527  3553



iConnectors
    
  s MathComponentData		(8)

mechanisms.c:     *97    216   2826  2827 .2829  2965  2966 .2968



iCops
    
  s VM		(3)

compartment.c:    ,353
vm.c:  289
vm.h: *60



iCurrentType
    
  s MathComponentData		(16)

mechanisms.c:     *75    295   299  .301   2249  2339  2417 .2681 .2846 .2997 .3062
       3540 ,3561  3576  3580  3648



iCursor
    
  s MathComponentArray		(5)

mathcomponent.c:  ,105  .234
mathcomponent.h:  *101
swiggable_heccer_wrap.c:      ,7706  7732



iDependencyFiles
    
  s DefinedSymbols		(1)

defsym.h:   *43



iDescendants
    
  s MathComponentData		(3)

mechanisms.c:     *73    295  ,3514



iDiagonals
    
  s VM		(4)

compartment.c:    ,83    85
vm.c:  339
vm.h: *66



iDiscreteTarget
    
  s MopsSpringMass		(7)

mechanism.c:       2459  2463  2479
vm.c:  609   613
vm.h: *234  ,264



iEntries
    
x s HeccerTabulatedGate		(33)
    
x s MinimumDegree		(6)
iEntries of HeccerTabulatedGate

mechanism.c:       2687  2689
mechanisms.c:     ,387  ,395   444   450   454  ,667  ,675  ,710  ,718   767   773
       777   908   914   918  ,1070 ,1078  1134  1140  1144
swiggable_heccer_wrap.c:      ,19843       19869
table.c:     146   392   1360  1367  1372 ,1717  1718  1719
table.h:    *82
iEntries of MinimumDegree

minimumdegree.c:  ,330   555   564   583   595
minimumdegree.h:  *36



iErrorCount
    
x s Heccer		(14)
    
x s Neurospaces		(1)
iErrorCount of Heccer

heccer.c:    89    133   190   273   330   396   418  .540   591   664   727
heccer.h:   *154
swiggable_heccer_wrap.c:      ,6152  6178
iErrorCount of Neurospaces

neurospaces.h:    *145



iEvent
    
  s MopsSpringMass		(7)

mechanism.c:       2436 .2448
vm.c:  609+  613
vm.h: *228  ,262



iExternal
    
  s ExternalNernst		(3)

mechanism.h:      *192
swiggable_heccer_wrap.c:      ,9897  9923



iFileParseCount
    
  s Neurospaces		(1)

neurospaces.h:    *149



iFirstEntry
    
  s TreespaceTraversal		(1)

treespacetraversal.h:   *103



iFirstPower
    
x s ChannelPersistentSteadyStateDualTau		(5)
    
x s ChannelSteadyStateSteppedTau		(5)
iFirstPower of ChannelPersistentSteadyStateDualTau

mechanism.c:       1241
mechanism.h:      *474
mechanisms.c:     ,1318
swiggable_heccer_wrap.c:      ,13207       13233
iFirstPower of ChannelSteadyStateSteppedTau

mechanism.c:       1118
mechanism.h:      *723
mechanisms.c:     ,1901
swiggable_heccer_wrap.c:      ,16571       16597



iFirstTable
    
x s ChannelPersistentSteadyStateDualTau		(9)
    
x s ChannelSteadyStateSteppedTau		(9)
iFirstTable of ChannelPersistentSteadyStateDualTau

mechanism.c:       1241
mechanism.h:      *482
mechanisms.c:     ,1311
swiggable_heccer_wrap.c:      ,13315       13341
table.c:     539  ,567   571  ,641
iFirstTable of ChannelSteadyStateSteppedTau

mechanism.c:       1118
mechanism.h:      *731
mechanisms.c:     ,1895
swiggable_heccer_wrap.c:      ,16679       16705
table.c:     1094 ,1122  1126 ,1211



iFlags
    
x s AlgorithmInstance		(1)
    
x s ImportedFile		(1)
    
x s NeurospacesOptions		(1)
    
x s PidinStack		(4)
    
x s PSymbolStack		(3)
    
x s symtab_HSolveListElement		(2)
    
x s symtab_IdentifierIndex		(2)
    
x s symtab_InputOutput		(1)
    
x s symtab_Parameters		(2)
iFlags of AlgorithmInstance

algorithminstance.h:    *113
iFlags of ImportedFile

importedfile.h:   *47
iFlags of NeurospacesOptions

neurospaces.h:    *57
iFlags of PidinStack

pidinstack.h:     *110   223  .400  .546
iFlags of PSymbolStack

psymbolstack.h:   *49   .100  .217
iFlags of symtab_HSolveListElement

symboltable.h:    *146
symbolvirtual_protos.h:  149
iFlags of symtab_IdentifierIndex

idin.h:     *54    327
iFlags of symtab_InputOutput

inputoutput.h:    *59
iFlags of symtab_Parameters

parameters.h:     *70    297



iFormatted
    
  s HeccerCommandTable		(2)

vm.c: *61    499



iFunc
    
x s rt_selector_algorithm_instances		(1)
    
x s rt_selector_symbols		(1)
iFunc of rt_selector_algorithm_instances

algorithminstance_vtable.h:   *35
iFunc of rt_selector_symbols

vtable.h:   *40



iHHFactorFlag
    
  s GateKinetic		(8)

mechanism.h:      *290
mechanisms.c:     ,517  ,840  ,1208
swiggable_heccer_wrap.c:      ,10863       10889
table.c:     403   452



iIdentifier
    
  s RegisteredCache		(1)

cacheregistry.h:  *63



iIndex
    
x s MopsAggregateCurrent		(5)
    
x s symtab_IdentifierIndex		(1)
iIndex of MopsAggregateCurrent

mechanism.c:       2337
vm.c:  639+
vm.h: *948  ,957
iIndex of symtab_IdentifierIndex

idin.h:     *62



iInstances
    
  s AlgorithmSet		(1)

algorithmset.h:   *52



iInternal
    
  s InternalNernst		(8)

mechanism.c:       587
mechanism.h:      *214
mechanisms.c:     ,2822  3946  3950 ,3952
swiggable_heccer_wrap.c:      ,10165       10191



iIntervalEntries
    
  s HeccerOptions		(17)

heccer.c:    432  ,868
heccer.h:   *79
main.c:     ,184
spiker2.c:  ,1418 ,1448 ,1478
spiker3.c:  ,1360 ,1390 ,1420
swiggable_heccer_wrap.c:      ,5878  5904
table.c:     204   314   548   788   1103



iIntervalSet
    
  s HeccerOptions		(3)

heccer.h:   *55
swiggable_heccer_wrap.c:      ,5550  5576



iLast
    
  s EventDistributorData		(8)

eventdistributor.c:      241   245  .262  ,336   468
eventdistributor.h:     *76
swiggable_heccer_wrap.c:      ,3581  3607



iLength
    
x s HeccerCommandInfo		(2)
    
x s symtab_String		(1)
iLength of HeccerCommandInfo

vm.c: *37    473
iLength of symtab_String

symboltable.h:    *56



iLevel
    
  s BiolevelSelection		(1)

biolevel.h: *76



iLineNumber
    
  s ParserContext		(2)

parsersupport.h:  *70    192



iMat
    
  s <unnamed>		(30)

addressing.c:      435
mechanism.c:       407   595   645   767   901   944   1048  1105  1228  1357  1734
       1779  1849  1934  2007
vm.h: *45   ,292  ,335  ,363  ,438  ,478  ,502  ,565  ,690  ,731  ,779  ,804  ,856
      ,933



iMatNumber
    
  s VM		(2)

mechanism.c:      ,1570
vm.h: *110



iMathComponents
    
  s MathComponentArray		(13)

addressing.c:      343
intermediary.c:    66    79
mathcomponent.c:  ,111   157
mathcomponent.h:  *89
mechanism.c:       294   1580  1584
mechanisms.c:     ,3576  3688
swiggable_heccer_wrap.c:      ,7536  7562



iMats
    
  s VM		(3)

mechanism.c:      ,1606
vm.c:  303
vm.h: *112



iMode
    
  s BiolevelSelection		(1)

biolevel.h: *72



iModel
    
  s TranslationServiceData		(10)

heccer.c:   ,113   115   155   157
heccer.h:   *44
heccer.h:   *44
mechanisms.c:      3415
segments.c:  234
swiggable_heccer_wrap.c:      ,21139       21165



iModelSourceType
    
  s MathComponent		(24)

mathcomponent.h:  *47
mechanism.c:       543   545   704   706   838   840   990   992   1165  1167  1294
       1296  1413  1415
mechanisms.c:     ,2358 ,2362 ,2436 ,2440 ,2710 ,2714
segments.c: ,89
swiggable_heccer_wrap.c:      ,7436  7462



iMopNumber
    
  s VM		(2)

mechanism.c:      ,1560
vm.h: *100



iMops
    
  s VM		(3)

mechanism.c:      ,1600
vm.c:  314
vm.h: *102



iNestingLevel
    
  s ParserContext		(1)

parsersupport.h:  *74



iOffset
    
  s field_2_operator		(3)

addressing.c:     *404   445   449



iOperand
    
  s field_2_operator		(2)

addressing.c:     *403   429



iOperator
    
x s MopsAggregateCurrent		(2)
    
x s MopsEventGenerate		(2)
    
x s MopsExponentialDecay		(2)
    
x s MopsFluxPool		(2)
    
x s MopsInitializeChannel		(2)
    
x s MopsInitializeChannelErev		(2)
    
x s MopsInternalNernst		(2)
    
x s MopsRegisterChannelCurrent		(2)
    
x s MopsReset		(2)
    
x s MopsSingleGateConcept		(2)
    
x s MopsSpringMass		(2)
    
x s MopsStoreChannelConductance		(1)
    
x s MopsStoreSingleChannelCurrent		(2)
    
x s MopsUpdateCompartmentCurrent		(2)
    
x s MopsVoltageTableDependency		(2)
iOperator of MopsAggregateCurrent

vm.h: *944  ,956
iOperator of MopsEventGenerate

vm.h: *303  ,334
iOperator of MopsExponentialDecay

vm.h: *742  ,772
iOperator of MopsFluxPool

vm.h: *815  ,832
iOperator of MopsInitializeChannel

vm.h: *513  ,528
iOperator of MopsInitializeChannelErev

vm.h: *549  ,564
iOperator of MopsInternalNernst

vm.h: *449  ,475
iOperator of MopsRegisterChannelCurrent

vm.h: *867  ,873
iOperator of MopsReset

vm.h: *373  ,383
iOperator of MopsSingleGateConcept

vm.h: *669  ,687
iOperator of MopsSpringMass

vm.h: *224  ,261
iOperator of MopsStoreChannelConductance

vm.h: *585
iOperator of MopsStoreSingleChannelCurrent

vm.h: *891  ,909
iOperator of MopsUpdateCompartmentCurrent

vm.h: *645  ,651
iOperator of MopsVoltageTableDependency

vm.h: *621  ,627



iOptions
    
x s HeccerOptions		(27)
    
x s symtab_BioComponent		(3)
iOptions of HeccerOptions

compartment.c:     55
heccer.c:    422  ,856
heccer.h:   *51
main.c:     ,188
mechanism.c:       174   530   542   691   703   825   837   977   989   1152  1164
       1281  1293  1400  1412  1942
mechanisms.c:      2391  3194  3226
minimumdegree.c:   103
swiggable_heccer_wrap.c:      ,5496  5522
iOptions of symtab_BioComponent

biocomp.h:  *77    372  ,480



iParent
    
x s Compartment		(17)
    
x s SerialMapper		(5)
iParent of Compartment

compartment.c:     117   213   317   428
compartment.h:    *39
minimumdegree.c:   294   389   391   392   410   449
segments.c: ,177  ,193   323  ,351
swiggable_heccer_wrap.c:      ,2711  2737
iParent of SerialMapper

mechanisms.c:      2816+
symboltable.h:    *77    100  ,103



iPool
    
x s ChannelAct		(8)
    
x s ChannelActConc		(8)
    
x s ChannelActInact		(8)
    
x s ChannelPersistentSteadyStateDualTau		(8)
    
x s ChannelPersistentSteadyStateTau		(8)
    
x s ChannelSpringMass		(8)
    
x s ChannelSteadyStateSteppedTau		(8)
iPool of ChannelAct

mechanism.c:       677
mechanism.h:      *412
mechanisms.c:     ,2508 ,3702  3704 ,3712
swiggable_heccer_wrap.c:      ,12379       12405
iPool of ChannelActConc

mechanism.c:       963
mechanism.h:      *825
mechanisms.c:     ,2600 ,3894  3896 ,3902
swiggable_heccer_wrap.c:      ,17920       17946
iPool of ChannelActInact

mechanism.c:       811
mechanism.h:      *379
mechanisms.c:     ,2520 ,3734  3736 ,3744
swiggable_heccer_wrap.c:      ,11941       11967
iPool of ChannelPersistentSteadyStateDualTau

mechanism.c:       1267
mechanism.h:      *470
mechanisms.c:     ,2532 ,3766  3768 ,3776
swiggable_heccer_wrap.c:      ,13153       13179
iPool of ChannelPersistentSteadyStateTau

mechanism.c:       1386
mechanism.h:      *522
mechanisms.c:     ,2544 ,3798  3800 ,3808
swiggable_heccer_wrap.c:      ,13917       13943
iPool of ChannelSpringMass

mechanism.c:       516
mechanism.h:      *64
mechanisms.c:     ,2568 ,3862  3864 ,3872
swiggable_heccer_wrap.c:      ,8574  8600
iPool of ChannelSteadyStateSteppedTau

mechanism.c:       1138
mechanism.h:      *719
mechanisms.c:     ,2556 ,3830  3832 ,3840
swiggable_heccer_wrap.c:      ,16517       16543



iPower
    
x s ChannelPersistentSteadyStateTau		(5)
    
x s MopsSingleGateConcept		(5)
    
x s PoweredActivatorConcept		(5)
    
x s PoweredGateConcept		(10)
iPower of ChannelPersistentSteadyStateTau

mechanism.c:       1370
mechanism.h:      *526
mechanisms.c:     ,1502
swiggable_heccer_wrap.c:      ,13971       13997
iPower of MopsSingleGateConcept

mechanism.c:       2639
vm.c:  549   553
vm.h: *677  ,689
iPower of PoweredActivatorConcept

mechanism.c:       947
mechanism.h:      *796
mechanisms.c:     ,690
swiggable_heccer_wrap.c:      ,17540       17566
iPower of PoweredGateConcept

mechanism.c:       661   783   795   917
mechanism.h:      *350
mechanisms.c:     ,367  ,647  ,1050
swiggable_heccer_wrap.c:      ,11561       11587



iPrincipalEntries
    
  s PSymbolSerialStack		(1)

psymbolserialstack.h:   *60



iPrincipalSerial
    
  s PSymbolSerialStack		(3)

psymbolserialstack.h:   *53    117   130



iRegistered
    
  s CacheRegistry		(1)

cacheregistry.h:  *83



iResults
    
  s VM		(4)

compartment.c:    ,364   366
vm.c:  363
vm.h: *76



iReversalPotential
    
x s ChannelAct		(9)
    
x s ChannelActConc		(9)
    
x s ChannelActInact		(9)
    
x s ChannelPersistentSteadyStateDualTau		(9)
    
x s ChannelPersistentSteadyStateTau		(9)
    
x s ChannelSpringMass		(9)
    
x s ChannelSteadyStateSteppedTau		(9)
iReversalPotential of ChannelAct

mechanism.c:       626   637
mechanism.h:      *404
mechanisms.c:     ,2506  3717  3721 ,3723
swiggable_heccer_wrap.c:      ,12270       12296
iReversalPotential of ChannelActConc

mechanism.c:       882   893
mechanism.h:      *817
mechanisms.c:     ,2598  3927  3931 ,3933
swiggable_heccer_wrap.c:      ,17811       17837
iReversalPotential of ChannelActInact

mechanism.c:       748   759
mechanism.h:      *371
mechanisms.c:     ,2518  3749  3753 ,3755
swiggable_heccer_wrap.c:      ,11832       11858
iReversalPotential of ChannelPersistentSteadyStateDualTau

mechanism.c:       1209  1220
mechanism.h:      *462
mechanisms.c:     ,2530  3781  3785 ,3787
swiggable_heccer_wrap.c:      ,13044       13070
iReversalPotential of ChannelPersistentSteadyStateTau

mechanism.c:       1338  1349
mechanism.h:      *514
mechanisms.c:     ,2542  3813  3817 ,3819
swiggable_heccer_wrap.c:      ,13808       13834
iReversalPotential of ChannelSpringMass

mechanism.c:       388   399
mechanism.h:      *56
mechanisms.c:     ,2566  3877  3881 ,3883
swiggable_heccer_wrap.c:      ,8465  8491
iReversalPotential of ChannelSteadyStateSteppedTau

mechanism.c:       1086  1097
mechanism.h:      *711
mechanisms.c:     ,2554  3845  3849 ,3851
swiggable_heccer_wrap.c:      ,16408       16434



iSecondPower
    
x s ChannelPersistentSteadyStateDualTau		(5)
    
x s ChannelSteadyStateSteppedTau		(5)
iSecondPower of ChannelPersistentSteadyStateDualTau

mechanism.c:       1253
mechanism.h:      *478
mechanisms.c:     ,1322
swiggable_heccer_wrap.c:      ,13261       13287
iSecondPower of ChannelSteadyStateSteppedTau

mechanism.c:       1124
mechanism.h:      *727
mechanisms.c:     ,1926
swiggable_heccer_wrap.c:      ,16625       16651



iSecondTable
    
x s ChannelPersistentSteadyStateDualTau		(8)
    
x s ChannelSteadyStateSteppedTau		(8)
iSecondTable of ChannelPersistentSteadyStateDualTau

mechanism.c:       1253
mechanism.h:      *486
mechanisms.c:     ,1312
swiggable_heccer_wrap.c:      ,13369       13395
table.c:    ,661   663  ,733
iSecondTable of ChannelSteadyStateSteppedTau

mechanism.c:       1124
mechanism.h:      *735
mechanisms.c:     ,1920
swiggable_heccer_wrap.c:      ,16733       16759
table.c:    ,1231  1235 ,1310



iSecondaries
    
  s HeccerCommandInfo		(3)

vm.c: *41    671   681



iSecondariesSize
    
  s HeccerCommandInfo		(2)

vm.c: *45    689



iSerial
    
x s EventDistributorMatrix		(4)
    
x s MathComponent		(20)
iSerial of EventDistributorMatrix

eventdistributor.c:      474
eventdistributor.h:     *63
swiggable_heccer_wrap.c:      ,3427  3453
iSerial of MathComponent

addressing.c:      287   347
mathcomponent.c:   161
mathcomponent.h:  *36
mechanism.c:       426   457   492   1475
mechanisms.c:      226  ,2349 ,2427  2493 ,2701
segments.c: ,82    208   339   360   361
swiggable_heccer_wrap.c:      ,7382  7408



iSerialEnd
    
  s Intermediary		(5)

addressing.c:      652
heccer.c:   ,157
intermediary.h:   *71
swiggable_heccer_wrap.c:      ,5305  5331



iSerialMechanism
    
  s TreespaceTraversal		(1)

treespacetraversal.h:   *127



iSerialPrincipal
    
  s TreespaceTraversal		(2)

treespacetraversal.h:   *119   257



iSerialSegment
    
  s TreespaceTraversal		(1)

treespacetraversal.h:   *123



iSerialStart
    
  s Intermediary		(6)

addressing.c:      640   651
heccer.c:   ,155
intermediary.h:   *67
swiggable_heccer_wrap.c:      ,5251  5277



iShape
    
  s HeccerTableApproximationOptions		(5)

swiggable_heccer_wrap.c:      ,19515       19541
table.c:     1355 ,1723
table.h:    *58



iSize
    
x s CacheRegistry		(1)
    
x s RegisteredCache		(1)
iSize of CacheRegistry

cacheregistry.h:  *79
iSize of RegisteredCache

cacheregistry.h:  *67



iSizeParameters
    
x s HeccerTabulatedGate		(6)
    
x s HeccerTabulatedSpringMass		(6)
iSizeParameters of HeccerTabulatedGate

swiggable_heccer_wrap.c:      ,19673       19699
table.c:     1575+      ,1706
table.h:    *68
iSizeParameters of HeccerTabulatedSpringMass

swiggable_heccer_wrap.c:      ,20117       20143
table.c:     1763+      ,1875
table.h:    *100



iSmallTableSize
    
  s HeccerOptions		(17)

heccer.c:    434  ,870
heccer.h:   *83
main.c:     ,186
spiker2.c:  ,1420 ,1450 ,1480
spiker3.c:  ,1362 ,1392 ,1422
swiggable_heccer_wrap.c:      ,5932  5958
table.c:     577   669   817   1132  1241



iSpikeGens
    
  s MathComponentData		(1)

mechanisms.c:     *85



iState
    
  s ParserContext		(1)

parsersupport.h:  *94



iStatus
    
x s Heccer		(18)
    
x s HeccerCommandTable		(3)
    
x s MathComponentData		(90)
    
x s TreespaceTraversal		(2)
iStatus of Heccer

heccer.c:    197  ,228   416  ,536+ ,874  ,911
heccer.h:   *152
main.c:     ,58
spiker1.c:  ,29
spiker2.c:  ,1264 ,1270 ,1276
spiker3.c:  ,1010 ,1016 ,1022
swiggable_heccer_wrap.c:      ,6098  6124
iStatus of HeccerCommandTable

vm.c: *53   .149   205
iStatus of MathComponentData

mechanisms.c:     *89    250  ,262   266   357   413   414   419   478   571  .575
       577  ,579   635   678   738   739   744   801   887   992  .996   998  ,1000
       1036  1037  1040  1098  1099  1100  1101  1104  1105  1110  1111  1168  1169
       1262 .1266  1268 ,1270  1307  1367  1368  1371  1447 .1451  1453 ,1455  1492
       1529  1605  1681 .1685  1687 ,1689  1726  1727  1772  1773  1846 .1850  1852
      ,1854  1891  1916  1953  1954  1957  1958  1959  1960  1966  1967  1971  1972
       2083  2132  2202 .2206  2208 ,2210  2638  2642 ,2644 ,2664  3536  3636  3646
       3647
iStatus of TreespaceTraversal

mechanisms.c:     ,3567
treespacetraversal.h:   *99



iSteps
    
  s ExternalState		(5)

calloutInjector.c:      *106  .201   207+  218



iSuccessors
    
  s SerialMapper		(3)

symboltable.h:    *70    101  ,104



iSymbolType
    
  s SolverMapper		(1)

solvermapper.h:   *53



iTable
    
x s ChannelPersistentSteadyStateTau		(9)
    
x s ChannelSpringMass		(8)
    
x s ConcentrationActivator		(10)
    
x s GateConcept		(16)
    
x s MopsEventGenerate		(6)
    
x s MopsSpringMass		(5)
    
x s SpikeGenerator		(5)
iTable of ChannelPersistentSteadyStateTau

mechanism.c:       1370
mechanism.h:      *530
mechanisms.c:     ,1496
swiggable_heccer_wrap.c:      ,14025       14051
table.c:     779  ,807   811  ,884
iTable of ChannelSpringMass

mechanism.c:       500
mechanism.h:      *80
mechanisms.c:     ,1777
swiggable_heccer_wrap.c:      ,8793  8819
table.c:     1006 ,1028 ,1048
iTable of ConcentrationActivator

mechanism.c:       947
mechanism.h:      *776
mechanisms.c:     ,682  ,891
swiggable_heccer_wrap.c:      ,17270       17296
table.c:     133   195  ,223  ,231
iTable of GateConcept

mechanism.c:       661   783   795   917
mechanism.h:      *328
mechanisms.c:     ,425  ,639  ,750  ,1117
swiggable_heccer_wrap.c:      ,11345       11371
table.c:     269  ,303  ,333  ,341   379
iTable of MopsEventGenerate

mechanism.c:       2987
vm.c:  623   627   631
vm.h: *317  ,338
iTable of MopsSpringMass

mechanism.c:       2403
vm.c:  609   613
vm.h: *238  ,265
iTable of SpikeGenerator

mechanism.c:       1463
mechanism.h:      *248
mechanisms.c:     ,3056
swiggable_heccer_wrap.c:      ,10598       10624



iTableIndex
    
  s MopsSingleGateConcept		(7)

addressing.c:      489   495
mechanism.c:       2641
vm.c:  549   553
vm.h: *673  ,688



iTabulatedGateCount
    
  s TabulatedGateTable		(14)

swiggable_heccer_wrap.c:      ,20498       20524
table.c:     1524  1530  1623  1680  1690 .1702  1727  1912  1922 .1934  1942
table.h:    *126



iTabulatedSpringMassCount
    
  s TabulatedSpringMassTable		(8)

swiggable_heccer_wrap.c:      ,20659       20685
table.c:     1811  1860  1867 .1871  1880
table.h:    *142



iTarget
    
x s EventDistributorMatrix		(6)
    
x s EventQueuerMatrix		(4)
    
x s EventList		(3)
iTarget of EventDistributorMatrix

eventdistributor.c:     ,253   527
eventdistributor.h:     *51
spiker2.c:  ,1190
swiggable_heccer_wrap.c:      ,3315  3341
iTarget of EventQueuerMatrix

eventdistributor.c:      784
eventdistributor.h:     *119
swiggable_heccer_wrap.c:      ,3959  3985
iTarget of EventList

eventdistributor.c:     *69   ,637   763



iTiming
    
  s NeurospacesOptions		(1)

neurospaces.h:    *69



iTop
    
x s PidinStack		(5)
    
x s PSymbolStack		(5)
iTop of PidinStack

pidinstack.h:     *106   441  ,450   481   531
iTop of PSymbolStack

psymbolstack.h:   *45    127   128   206   239



iType
    
x s _algorithm_instances_typeinfo		(1)
    
x s _typeinfo_symbols		(1)
    
x s descr_Attachment		(1)
    
x s MathComponent		(65)
    
x s MathComponentInfo		(5)
    
x s RegisteredCache		(1)
    
x s symtab_HSolveListElement		(1)
    
x s symtab_InputOutput		(1)
    
x s symtab_Parameters		(3)
    
x s TreespaceTraversal		(1)
iType of _algorithm_instances_typeinfo

algorithminstance_vtable.h:   *48
iType of _typeinfo_symbols

vtable.h:   *61
iType of descr_Attachment

attachment.h:     *112
iType of MathComponent

addressing-aggregator1.c:      980   982   984   986
addressing-purk-test-axon.c:   926   928   930   932
channel1-nernst1.c:      409   411   413
channel2-nernst1.c:      615   617   619   621
channel2-nernst2.c:      643   645   647   649   651
compartment.c:     420
doublea-aggregator.c:    793   795
hh1.c:       478   480
intermediary.c:    87
mathcomponent.c:   217   280   383
mathcomponent.h:  *30
mechanism.c:       319
mechanisms.c:     ,2343 ,2421 ,2700  3692
pool1-contributors2.c:   586   588   590
pool1-feedback1.c:       528   530   532
pool1-feedback2.c:       528   530   532
pool1-nernst.c:    408   410   412
pool1.c:     380   382
pool2.c:     673   675
segments.c: ,72
singlea-naf2-aggregator.c:     610   612
spiker1.c:   564   566   568
spiker2.c:   1147  1149  1151
spiker3.c:   918   920   922
swiggable_heccer_wrap.c:      ,7328  7354
iType of MathComponentInfo

mathcomponent.c:   338   342
mathcomponent.h:  *109
swiggable_heccer_wrap.c:      ,7864  7890
iType of RegisteredCache

cacheregistry.h:  *59
iType of symtab_HSolveListElement

symboltable.h:    *142
iType of symtab_InputOutput

inputoutput.h:    *49
iType of symtab_Parameters

parameters.h:     *66    323  ,555
iType of TreespaceTraversal

treespacetraversal.h:   *109



iValue
    
  s HeccerCommandInfo		(15)

vm.c: *29    126+  128+  229   238   508   515   542   556   581   601   616   634



iVariablesActive
    
  s OutputGenerator		(7)

output.c:    56    63   .65    111
output.h:   *32
swiggable_heccer_wrap.c:      ,18298       18324



iVariablesAllocated
    
  s OutputGenerator		(5)

output.c:   ,164  ,209
output.h:   *30
swiggable_heccer_wrap.c:      ,18244       18270



iVerbosity
    
  s NeurospacesOptions		(1)

neurospaces.h:    *61



iVms
    
  s VM		(6)

compartment.c:    ,368   370
heccer.c:    632
mechanism.c:       3052
vm.c:  375
vm.h: *84



indexers
    
  s Heccer		(33)

addressing.c:      200   215
compartment.c:     73    75    77    79    491
heccer.c:   .458
heccer.h:   *216
mechanism.c:       245   3149
minimumdegree.c:   89    93    118   122   126   130   134   144   148   180   184
       215   219   223   227   231   241   245  .268  .361
swiggable_heccer_wrap.c:      ,6612  6638



inter
    
  s Heccer		(87)

addressing.c:      279   283   339   343   640   651   652
compartment.c:     83    93    101   103   117   141+  153+  201   209   213   287+
       293+  305   313   317   333   364   368   487   497   533
heccer.c:    154  .454  .907
heccer.c:   ,155  ,157
heccer.h:   *212
intermediary.c:    52    61    66    73    79    337   338   342
main.c:     .57
mechanism.c:       230   249   251   256   258   292   294+  314   1539  1540  1562
       1576  1580  1584  3145  3155  3156
mechanisms.c:      3520 ,3557 .3671
minimumdegree.c:   294   381   449   499   506   513
segments.c: .64   .264  .311  .380
spiker1.c:  .28
spiker2.c:  .1263 .1269 .1275
spiker3.c:  .1009 .1015 .1021
swiggable_heccer_wrap.c:      ,6552 .6578



ioh
    
  s symtab_BioComponent		(11)

biocomp.h:  *57   .441  .454  .503  ,508   509  ,512   513  .561  .563  .565



iohc
    
  s symtab_IOHierarchy		(1)

iohier.h:   *71



iol
    
  s symtab_IOHierarchy		(11)

biocomp.h:  .441  .454  .503  ,508   509  ,512   513  .561  .563  .565
iohier.h:   *67



it_interval
    
x s itimerspec		(1)
    
x s itimerval		(1)
it_interval of itimerspec

time.h:     *161
it_interval of itimerval

time.h:     *110



it_value
    
x s itimerspec		(1)
    
x s itimerval		(1)
it_value of itimerspec

time.h:     *162
it_value of itimerval

time.h:     *112