Cross References

H

A B C D E F G H I J K L M 
N O P Q R S T U V W X Y Z + 



macro HAVE_FLOAT_H

config.h:   *5



macro HAVE_INTTYPES_H

config.h:   *8



macro HAVE_LIMITS_H

config.h:   *11



macro HAVE_LOCALECONV

config.h:   *14



macro HAVE_LOCALE_H

config.h:   *17



macro HAVE_MEMORY_H

config.h:   *20



macro HAVE_STDBOOL_H

config.h:   *23



macro HAVE_STDINT_H

config.h:   *26



macro HAVE_STDLIB_H

config.h:   *29



macro HAVE_STRCHR

config.h:   *32



macro HAVE_STRINGS_H

config.h:   *35



macro HAVE_STRING_H

config.h:   *38



macro HAVE_SYS_STAT_H

config.h:   *41



macro HAVE_SYS_TYPES_H

config.h:   *44



macro HAVE_UNISTD_H

config.h:   *47



macro HAVE__BOOL

config.h:   *50



macro HECCER_ADDRESSING_H

addressing.h:     *20



macro HECCER_CALLOUT_H

callout.h:  *49



macro HECCER_COMPARTMENT_H

compartment.h:    *20



macro HECCER_COP_BACKWARD_SUBSTITUTION

compartment.c:     327   636
vm.c:  72
vm.h: *975



macro HECCER_COP_BE_CALC_RESULTS

vm.h: *988



macro HECCER_COP_BE_FINISH

vm.h: *989



macro HECCER_COP_BE_FOBA_ELIMINATION

vm.h: *987



macro HECCER_COP_BE_SET_DIAGONAL

vm.h: *990



macro HECCER_COP_BE_SKIP_DIAGONAL

vm.h: *991



macro HECCER_COP_CN_CALC_RESULTS

vm.h: *982



macro HECCER_COP_CN_FINISH

vm.h: *983



macro HECCER_COP_CN_FOBA_ELIMINATION

vm.h: *981



macro HECCER_COP_CN_SET_DIAGONAL

vm.h: *984



macro HECCER_COP_CN_SKIP_DIAGONAL

vm.h: *985



macro HECCER_COP_FINISH

compartment.c:     301   340
vm.c:  74
vm.h: *977



macro HECCER_COP_FINISH_ROW

compartment.c:     329   646
vm.c:  73
vm.h: *976



macro HECCER_COP_FORWARD_ELIMINATION

compartment.c:     277   546
vm.c:  71
vm.h: *974



macro HECCER_COP_NEXT_ROW

compartment.c:     254   572
vm.c:  76
vm.h: *979



macro HECCER_COP_SET_DIAGONAL

compartment.c:     242   556
vm.c:  75
vm.h: *978



macro HECCER_DUMP_ALL

heccer.c:    389
heccer.h:   *274
main.c:      102



macro HECCER_DUMP_INDEXERS_STRUCTURE

heccer.h:   *279
minimumdegree.c:   560   579   591



macro HECCER_DUMP_INDEXERS_SUMMARY

heccer.h:   *278
minimumdegree.c:   553



macro HECCER_DUMP_INTERMEDIARY_COMPARTMENTS_PARAMETERS

compartment.c:     440
heccer.h:   *281



macro HECCER_DUMP_INTERMEDIARY_COMPARTMENT_SUMMARY

heccer.h:   *282



macro HECCER_DUMP_INTERMEDIARY_MECHANISM_SUMMARY

heccer.h:   *283



macro HECCER_DUMP_INTERMEDIARY_STRUCTURE

compartment.c:     426
heccer.h:   *284



macro HECCER_DUMP_INTERMEDIARY_SUMMARY

heccer.h:   *285
intermediary.c:    278



macro HECCER_DUMP_SERVICE

heccer.c:    446
heccer.h:    274  *276



macro HECCER_DUMP_TABLE_GATE_SUMMARY

heccer.h:   *287
table.c:     1346  1353  1358



macro HECCER_DUMP_TABLE_GATE_TABLES

heccer.h:   *288
table.c:     1363



macro HECCER_DUMP_VM_AGGREGATORS

addressing-aggregator1.c:      38
doublea-aggregator.c:    33
heccer.h:   *298
singlea-naf2-aggregator.c:     33
vm.c:  383



macro HECCER_DUMP_VM_CHANNEL_POOL_FLUXES

addressing-aggregator1.c:      34
addressing-purk-test-axon.c:   36
channel1-nernst1.c:      31
channel2-nernst1.c:      31
channel2-nernst2.c:      31
heccer.h:   *295
pool1-contributors2.c:   31
pool1-nernst.c:    31
pool1.c:     31
pool2.c:     30



macro HECCER_DUMP_VM_COMPARTMENT_DATA

addressing-aggregator1.c:      32
addressing-purk-test-axon.c:   34
channel1-nernst1.c:      29
channel2-nernst1.c:      29
channel2-nernst2.c:      29
doublea-aggregator.c:    28
heccer.h:   *291
hh1.c:       34
pool1-contributors2.c:   29
pool1-feedback1.c:       28
pool1-feedback2.c:       28
pool1-nernst.c:    29
pool1.c:     29
pool2.c:     28
singlea-naf-current.c:   25
singlea-naf.c:     26
singlea-naf2-aggregator.c:     28
spiker1.c:   33
spiker2.c:   31
spiker3.c:   31
vm.c:  280



macro HECCER_DUMP_VM_COMPARTMENT_MATRIX

addressing-aggregator1.c:      31
addressing-purk-test-axon.c:   33
channel1-nernst1.c:      28
channel2-nernst1.c:      28
channel2-nernst2.c:      28
doublea-aggregator.c:    27
heccer.h:   *290
hh1.c:       33
perfectclamp-passive1.c:       31
perfectclamp-passive10-2.c:    31
perfectclamp-passive10.c:      31
pool1-contributors2.c:   28
pool1-feedback1.c:       27
pool1-feedback2.c:       27
pool1-nernst.c:    28
pool1.c:     28
pool2.c:     27
singlea-naf-current.c:   24
singlea-naf.c:     25
singlea-naf2-aggregator.c:     27
spiker1.c:   32
spiker2.c:   30
spiker3.c:   30
vclamp-passive.c:  31
vclamp-sodium.c:   31
vm.c:  335   347   359   371



macro HECCER_DUMP_VM_COMPARTMENT_OPERATIONS

addressing-aggregator1.c:      33
addressing-purk-test-axon.c:   35
channel1-nernst1.c:      30
channel2-nernst1.c:      30
channel2-nernst2.c:      30
doublea-aggregator.c:    29
heccer.h:   *292
hh1.c:       35
pool1-contributors2.c:   30
pool1-feedback1.c:       29
pool1-feedback2.c:       29
pool1-nernst.c:    30
pool1.c:     30
pool2.c:     29
singlea-naf-current.c:   26
singlea-naf.c:     27
singlea-naf2-aggregator.c:     29
spiker1.c:   34
spiker2.c:   32
spiker3.c:   32
vm.c:  287



macro HECCER_DUMP_VM_MECHANISM_DATA

addressing-aggregator1.c:      35
addressing-purk-test-axon.c:   37
channel1-nernst1.c:      32
channel2-nernst1.c:      32
channel2-nernst2.c:      32
doublea-aggregator.c:    30
heccer.h:   *293
hh1.c:       36
pool1-contributors2.c:   32
pool1-feedback1.c:       30
pool1-feedback2.c:       30
pool1-nernst.c:    32
pool1.c:     32
pool2.c:     31
singlea-naf-current.c:   27
singlea-naf.c:     28
singlea-naf2-aggregator.c:     30
spiker1.c:   35
spiker2.c:   33
spiker3.c:   33
vm.c:  301



macro HECCER_DUMP_VM_MECHANISM_OPERATIONS

addressing-aggregator1.c:      36
addressing-purk-test-axon.c:   38
channel1-nernst1.c:      33
channel2-nernst1.c:      33
channel2-nernst2.c:      33
doublea-aggregator.c:    31
heccer.h:   *294
hh1.c:       37
perfectclamp-passive1.c:       32
perfectclamp-passive10-2.c:    32
perfectclamp-passive10.c:      32
pool1-contributors2.c:   33
pool1-feedback1.c:       31
pool1-feedback2.c:       31
pool1-nernst.c:    33
pool1.c:     33
pool2.c:     32
singlea-naf-current.c:   28
singlea-naf.c:     29
singlea-naf2-aggregator.c:     31
spiker1.c:   36
spiker2.c:   34
spiker3.c:   34
vclamp-passive.c:  32
vclamp-sodium.c:   32
vm.c:  312



macro HECCER_DUMP_VM_SUMMARY

addressing-aggregator1.c:      37
addressing-purk-test-axon.c:   39
channel1-nernst1.c:      34
channel2-nernst1.c:      34
channel2-nernst2.c:      34
doublea-aggregator.c:    32
heccer.h:   *296
hh1.c:       38
pool1-contributors2.c:   34
pool1-feedback1.c:       32
pool1-feedback2.c:       32
pool1-nernst.c:    34
pool1.c:     34
pool2.c:     33
singlea-naf-current.c:   29
singlea-naf.c:     30
singlea-naf2-aggregator.c:     32
spiker1.c:   37
spiker2.c:   35
spiker3.c:   35



macro HECCER_EVENT_DISTRIBUTOR_H

eventdistributor.h:     *20



macro HECCER_EVENT_H

event.h:    *20



macro HECCER_HECCER_H

heccer.h:   *20



macro HECCER_INDEXERS_H

indexers.h: *20



macro HECCER_INTERMEDIARY_H

intermediary.h:   *20



macro HECCER_INTERPOL_INTERVAL_DEFAULT_ENTRIES

heccer.c:    870
heccer.h:   *137



macro HECCER_INTERVAL_CONCENTRATION_GATE_DEFAULT_END

heccer.c:    866
heccer.h:   *129



macro HECCER_INTERVAL_CONCENTRATION_GATE_DEFAULT_START

heccer.c:    865
heccer.h:   *125



macro HECCER_INTERVAL_DEFAULT_END

heccer.c:    863
heccer.h:   *121



macro HECCER_INTERVAL_DEFAULT_ENTRIES

heccer.c:    868
heccer.h:   *133



macro HECCER_INTERVAL_DEFAULT_START

heccer.c:    862
heccer.h:   *117



macro HECCER_MATHCOMPONENT_H

mathcomponent.h:  *20



macro HECCER_MINIMUM_DEGREE_H

minimumdegree.h:  *20



macro HECCER_MOP_AGGREGATECURRENT

mechanism.c:       1667  2329
vm.c:  104   634
vm.h:  956  *1017



macro HECCER_MOP_CALLOUT

mechanism.c:       1680  2344
vm.c:  92
vm.h:  413  *999



macro HECCER_MOP_COMPARTMENT

mechanism.c:       1644  2284
vm.c:  93
vm.h:  185  *996



macro HECCER_MOP_COMPARTMENT_BARRIER

mechanism.c:       1659  2317
vm.h: *1024



macro HECCER_MOP_CONCEPTGATE

mechanism.c:       1833  2623
vm.c:  94    542
vm.h:  687  *1003



macro HECCER_MOP_EVENTGENERATE

mechanism.c:       1987  2913
vm.c:  95    616
vm.h:  334  *1011



macro HECCER_MOP_EXPONENTIALDECAY

mechanism.c:       1914  2823
vm.c:  96    515
vm.h:  772  *1005



macro HECCER_MOP_FINISH

mechanism.c:       2076  2085  3088  3097
vm.c:  97
vm.h:  147  *997



macro HECCER_MOP_FLUXPOOL

mechanism.c:       1968  2890
vm.c:  98
vm.h:  832  *1006



macro HECCER_MOP_INITIALIZECHANNEL

mechanism.c:       1756  2547
vm.c:  99    508
vm.h:  528  *1001



macro HECCER_MOP_INITIALIZECHANNELEREV

mechanism.c:       1769  2566
vm.c:  100   581
vm.h:  564  *1009



macro HECCER_MOP_INTERNALNERNST

mechanism.c:       1718  2505
vm.c:  105   556
vm.h:  475  *1008



macro HECCER_MOP_LOADVOLTAGETABLE

mechanism.c:       1820  2606
vm.c:  101
vm.h:  627  *1002



macro HECCER_MOP_REGISTERCHANNELCURRENT

mechanism.c:       1871  2763
vm.c:  102
vm.h:  873  *1007



macro HECCER_MOP_RESET

mechanism.c:       2043  3008
vm.h:  383  *1012



macro HECCER_MOP_SPRINGMASS

mechanism.c:       1697  2387
vm.c:  106   601
vm.h:  261  *1010



macro HECCER_MOP_STORECHANNELCONDUCTANCE

mechanism.c:       1801  2585
vm.h: *1004



macro HECCER_MOP_STORESINGLECHANNELCURRENT

mechanism.c:       1895  2799
vm.c:  107
vm.h:  909  *1015



macro HECCER_MOP_UPDATECOMPARTMENTCURRENT

mechanism.c:       1882  2778
vm.c:  103
vm.h:  651  *1014



macro HECCER_NEUROSPACES_HECCER_H

heccer.h:   *20
heccer.h:   *20



macro HECCER_NEUROSPACES_MECHANISMS_H

mechanisms.h:     *20



macro HECCER_NEUROSPACES_SEGMENTS_H

segments.h: *20



macro HECCER_OPTION_BACKWARD_EULER

compartment.c:     55
heccer.h:   *96
mechanism.c:       174



macro HECCER_OPTION_BRANCHES_FIRST_SCHEDULING

heccer.h:   *92
minimumdegree.c:   103



macro HECCER_OPTION_ENABLE_AGGREGATORS

addressing-aggregator1.c:      30
doublea-aggregator.c:    26
heccer.h:   *112
mechanism.c:       542   703   837   989   1164  1293  1412
singlea-naf2-aggregator.c:     26



macro HECCER_OPTION_ENABLE_INDIVIDUAL_CURRENTS

addressing-aggregator1.c:      30
doublea-aggregator.c:    26
heccer.h:   *108
mechanism.c:       530   691   825   977   1152  1281  1400  1942
singlea-naf-current.c:   23
singlea-naf2-aggregator.c:     26



macro HECCER_OPTION_PASSIVE_SYNCHANS

heccer.h:   *100
mechanisms.c:      2391  3194  3226



macro HECCER_OUTPUTGENERATOR_H

output.h:   *20



macro HECCER_PERFECTCLAMP_H

perfectclamp.h:   *20



macro HECCER_SERVICE_H

service.h:  *20



macro HECCER_SOURCE_NEUROSPACES

config.h:   *53



macro HECCER_SOURCE_TYPING

config.h:   *56



macro HECCER_STATIC_TABULATED_GATES

table.c:    *1685 *1917



macro HECCER_STATUS_PHASE_0

heccer.h:   *235



macro HECCER_STATUS_PHASE_1

heccer.c:    874
heccer.h:   *239



macro HECCER_STATUS_PHASE_2

heccer.c:    197   228   911
heccer.h:   *243
main.c:      58
spiker1.c:   29
spiker2.c:   1264  1270  1276
spiker3.c:   1010  1016  1022



macro HECCER_STATUS_PHASE_3

heccer.h:   *247



macro HECCER_STATUS_PHASE_4

heccer.h:   *251



macro HECCER_STATUS_PHASE_5

heccer.h:   *255



macro HECCER_TABLE_H

table.h:    *20



macro HECCER_TABULATED_GATES_MAX

table.c:     1680  1912
table.h:    *116   122



macro HECCER_TABULATED_SPRINGMASS_MAX

table.c:     1860
table.h:    *132   138



macro HECCER_TEST_CONSTRUCT

main.c:     *56    167
spiker1.c:  *27



macro HECCER_TEST_CONSTRUCT_SOURCE

spiker2.c:  *1262  1375
spiker3.c:  *1008  1317



macro HECCER_TEST_CONSTRUCT_TARGET1

spiker2.c:  *1268  1388
spiker3.c:  *1014  1330



macro HECCER_TEST_CONSTRUCT_TARGET2

spiker2.c:  *1274  1401
spiker3.c:  *1020  1343



macro HECCER_TEST_INITIATE

hh1.c:      *506
main.c:     *62    204
perfectclamp-passive1.c:      *126
perfectclamp-passive10-2.c:   *740
perfectclamp-passive10.c:     *740
spiker1.c:  *605
spiker2.c:  *1199  1508
spiker3.c:  *956   1450
springmass1.c:    *258
springmass2.c:    *258
springmass3.c:    *251
springmass4.c:    *251
vclamp-passive.c: *137
vclamp-sodium.c:  *362



macro HECCER_TEST_INTERPOL_INTERVAL_DEFAULT_ENTRIES

main.c:     *78    186
spiker2.c:  *1296  1420  1450  1480
spiker3.c:  *1042  1362  1392  1422
table-dual-kdr.c: *23
table-dual-km.c:  *23
table-kdr.c:      *23
table-kdr2.c:     *23
table-kh.c: *23
table-km.c: *23



macro HECCER_TEST_INTERVAL_DEFAULT_END

main.c:     *70    176
spiker2.c:  *1288  1410  1440  1470
spiker3.c:  *1034  1352  1382  1412
table-cap.c:      *26
table-cat.c:      *26
table-dual-kdr.c: *25
table-dual-km.c:  *25
table-k2.c: *26
table-ka.c: *24
table-kc.c: *26
table-kdr.c:      *25
table-kdr2.c:     *25
table-kh.c: *25
table-km.c: *25
table-naf.c:      *24
table-nap.c:      *24



macro HECCER_TEST_INTERVAL_DEFAULT_ENTRIES

main.c:     *74    184
spiker2.c:  *1292  1418  1448  1478
spiker3.c:  *1038  1360  1390  1420
table-cap.c:      *27
table-cat.c:      *27
table-dual-kdr.c: *26
table-dual-km.c:  *26
table-k2.c: *27
table-ka.c: *25
table-kc.c: *27
table-kdr.c:      *26
table-kdr2.c:     *26
table-kh.c: *26
table-km.c: *26
table-naf.c:      *25
table-nap.c:      *25



macro HECCER_TEST_INTERVAL_DEFAULT_START

main.c:     *66    174
spiker2.c:  *1284  1408  1438  1468
spiker3.c:  *1030  1350  1380  1410
table-cap.c:      *25
table-cat.c:      *25
table-dual-kdr.c: *24
table-dual-km.c:  *24
table-k2.c: *25
table-ka.c: *23
table-kc.c: *25
table-kdr.c:      *24
table-kdr2.c:     *24
table-kh.c: *24
table-km.c: *24
table-naf.c:      *23
table-nap.c:      *23



macro HECCER_TEST_NAME

main.c:     *52    163



macro HECCER_TEST_OPTIONS

addressing-aggregator1.c:     *30
doublea-aggregator.c:   *26
main.c:     *82    188
singlea-naf-current.c:  *23
singlea-naf2-aggregator.c:    *26



macro HECCER_TEST_OUTPUT

hh1.c:      *512
main.c:     *86    242
spiker1.c:  *613
spiker2.c:  *1207  1552
spiker3.c:  *964   1494
springmass1.c:    *264
springmass2.c:    *264
springmass3.c:    *257
springmass4.c:    *257



macro HECCER_TEST_REPORTING_GRANULARITY

addressing-purk-test-axon.c:  *30
channel1-nernst1.c:     *26
channel2-nernst1.c:     *26
channel2-nernst2.c:     *26
hh1.c:      *31
main.c:     *90    246
perfectclamp-passive1.c:      *29
perfectclamp-passive10-2.c:   *29
perfectclamp-passive10.c:     *29
pool1-contributors2.c:  *26
pool1-feedback1.c:      *25
pool1-feedback2.c:      *25
pool1-nernst.c:   *26
pool1.c:    *26
pool2.c:    *25
singlea-naf.c:    *23
spiker1.c:  *30
spiker2.c:  *28    1556
spiker3.c:  *28    1498
springmass1.c:    *28
springmass2.c:    *28
springmass3.c:    *28
springmass4.c:    *28
vclamp-passive.c: *29
vclamp-sodium.c:  *29



macro HECCER_TEST_SCHEDULE

main.c:     *94    238
perfectclamp-passive1.c:      *132
perfectclamp-passive10-2.c:   *746
perfectclamp-passive10.c:     *746
vclamp-passive.c: *144
vclamp-sodium.c:  *369



macro HECCER_TEST_STEPS

addressing-purk-test-axon.c:  *31
channel1-nernst1.c:     *27
channel2-nernst1.c:     *27
channel2-nernst2.c:     *27
hh1.c:      *32
main.c:     *98    226
perfectclamp-passive1.c:      *30
perfectclamp-passive10-2.c:   *30
perfectclamp-passive10.c:     *30
pool1-contributors2.c:  *27
pool1-feedback1.c:      *26
pool1-feedback2.c:      *26
pool1-nernst.c:   *27
pool1.c:    *27
pool2.c:    *26
singlea-naf.c:    *24
spiker1.c:  *31
spiker2.c:  *29    1534
spiker3.c:  *29    1476
springmass1.c:    *29
springmass2.c:    *29
springmass3.c:    *29
springmass4.c:    *29
table-cap.c:      *28
table-cat.c:      *28
table-dual-kdr.c: *27
table-dual-km.c:  *27
table-k2.c: *28
table-ka.c: *26
table-kc.c: *28
table-kdr.c:      *27
table-kdr2.c:     *27
table-kh.c: *27
table-km.c: *27
table-naf.c:      *26
table-nap.c:      *26
vclamp-passive.c: *30
vclamp-sodium.c:  *30



macro HECCER_TEST_TESTED_THINGS

addressing-aggregator1.c:     *31
addressing-purk-test-axon.c:  *33
channel1-nernst1.c:     *28
channel2-nernst1.c:     *28
channel2-nernst2.c:     *28
doublea-aggregator.c:   *27
hh1.c:      *33
main.c:     *102   214   216+  248   250   252+  264   266   268+
perfectclamp-passive1.c:      *31
perfectclamp-passive10-2.c:   *31
perfectclamp-passive10.c:     *31
pool1-contributors2.c:  *28
pool1-feedback1.c:      *27
pool1-feedback2.c:      *27
pool1-nernst.c:   *28
pool1.c:    *28
pool2.c:    *27
singlea-naf-current.c:  *24
singlea-naf.c:    *25
singlea-naf2-aggregator.c:    *27
spiker1.c:  *32
spiker2.c:  *30    1518  1520+       1522+       1524+       1558  1560  1562+
       1564+       1566+       1578  1580  1582+       1584+       1586+
spiker3.c:  *30    1460  1462+       1464+       1466+       1500  1502  1504+
       1506+       1508+       1520  1522  1524+       1526+       1528+
vclamp-passive.c: *31
vclamp-sodium.c:  *31



macro HECCER_TEST_TIME_GRANULARITY

channel1-nernst1.c:     *36
channel2-nernst1.c:     *36
channel2-nernst2.c:     *36
main.c:     *109   230
spiker2.c:  *1316  1538
spiker3.c:  *1062  1480
vclamp-passive.c:  144
vclamp-sodium.c:   369



macro HECCER_TEST_TIME_STEP

channel1-nernst1.c:     *37
channel2-nernst1.c:     *37
channel2-nernst2.c:     *37
doublea-aggregator.c:   *35
hh1.c:      *40
main.c:     *116   172   230
perfectclamp-passive1.c:      *34
perfectclamp-passive10-2.c:   *34
perfectclamp-passive10.c:     *34
pool1-contributors2.c:  *36
pool1-feedback1.c:      *34
pool1-feedback2.c:      *34
pool1-nernst.c:   *36
pool1.c:    *36
pool2.c:    *35
singlea-naf-current.c:  *31
singlea-naf.c:    *32
singlea-naf2-aggregator.c:    *35
spiker1.c:  *39
spiker2.c:  *37    1406  1436  1466  1538
spiker3.c:  *37    1348  1378  1408  1480
springmass1.c:    *30
springmass2.c:    *30
springmass3.c:    *30
springmass4.c:    *30
vclamp-passive.c: *34
vclamp-sodium.c:  *34



macro HECCER_VCLAMP_H

vclamp.h:   *20



macro HECCER_VM_H

vm.h: *20



macro HINES_LISTLIST_H

hines_listlist.h: *12



macro HINES_LIST_H

hines_list.h:     *31



macro HOST_NAME_MAX

local_lim.h:      *89



typedef HSolveList

algorithmset.h:    40    48
biocomp.h:   99
defsym.h:    39    50    56
hines_list.h:     *45
hines_listlist.h:  33    45
iohier.h:    45
symbols.h:   60



typedef HSolveListElement

algorithmclass.h:  92
algorithminstance.h:     105
hines_list.h:     *43
hines_listlist.h:  41
importedfile.h:    39
symboltable.h:     122



macro HSolveListElementInit

hines_list.h:     *102



macro HSolveListElementLink

hines_list.h:     *114



macro HSolveListEnqueue

hines_list.h:     *198



macro HSolveListEntail

hines_list.h:     *213



macro HSolveListHead

hines_list.h:     *229



macro HSolveListInit

hines_list.h:     *134



macro HSolveListInsertWithPred

hines_list.h:     *163



macro HSolveListInsertWithSucc

hines_list.h:     *181



macro HSolveListIsEmpty

hines_list.h:     *154



typedef HSolveListList

hines_listlist.h: *26    130



class HSolveListList

hines_listlist.h: +26   *29



typedef HSolveListListElement

hines_listlist.h: *24



class HSolveListListElement

hines_listlist.h: +24   *37



macro HSolveListListElementListInit

hines_listlist.h: *92



macro HSolveListListEnqueue

hines_listlist.h: *104



macro HSolveListListInit

hines_listlist.h: *80



HSolveListListIsEmpty

hines_listlist.h: +130



macro HSolveListListList

hines_listlist.h: *74



macro HSolveListListRemove

hines_listlist.h: *120



macro HSolveListMergeAtHead

hines_list.h:     *357



macro HSolveListMergeAtTail

hines_list.h:     *375



macro HSolveListMergeWithPred

hines_list.h:     *322



macro HSolveListMergeWithSucc

hines_list.h:     *340



macro HSolveListNext

hines_list.h:     *243



macro HSolveListPrev

hines_list.h:     *249



macro HSolveListRemove

hines_list.h:     *270



macro HSolveListRemoveHead

hines_list.h:     *284



macro HSolveListRemoveTail

hines_list.h:     *296



macro HSolveListTail

hines_list.h:     *237



macro HSolveListUnMerge

hines_list.h:     *308



macro HSolveListValidPred

hines_list.h:     *261



macro HSolveListValidSucc

hines_list.h:     *255



macro HUGE

math.h:     *309



macro HUGE_VAL

huge_val.h: *29



class Heccer

addressing.c:      35    42    69    117   188   269   330   390   530   584   629
addressing.h:     +25    46    50    54    58    62    66
callout.h:   89
callout1.c:  167
calloutInjector.c:       182
cbc.c:      +22
compartment.c:     43    477   525
compartment.h:     62    68    70
event.c:     40    88    143
event.h:     32    34    36
heccer.c:    29    48    85    129   186   269   326   387   392   496   587   660
       723   772   781   819   830   831+  899   903
heccer.c:    29
heccer.h:    52
heccer.h:   +26   *141   260   262   264   266   268   270   272   303   307   309
       311   318   327
heccer.h:    52
intermediary.c:    44    329
intermediary.h:    80    87
main.c:      28
main.h:      19
mechanism.c:       36    43    72    150   1632  2121  2266  3135
mechanism.h:      +837   842   844   846   848
mechanisms.c:      55    195   197   2287  3123  3400  3663
minimumdegree.c:   30    35    40    42    44    85    174   209   262   355   493
minimumdegree.h:  +26    56
segments.c:  37    39    41    62+   219   300   376
service.h:  +23    30
spiker2.c:   1134  1135  1136
spiker3.c:   905   906   907
swiggable_heccer_wrap.c:       1847+       1879+       1918+       1950+       1982+
       2014+       3127+       3189+       3216+       5391+       5453+       6018+
       6053+       6084+       6111+       6138+       6165+       6192+       6223+
       6250+       6278+       6305+       6333+       6360+       6391+       6418+
       6449+       6476+       6507+       6534+       6565+       6592+       6625+
       6656+       6687+       6714+       6745+       6772+       6805+       6836
       6843+       6857+       6882+       6909+       6936+       6963+       6990+
       7017+       7044+       7104+       7138+       7168+       7199  7223  7243
       7270  7286  7300  18122+      18149+      18176+      18203+      20746+
       20779+      20883+      20918+      21225+
table.c:     31    36    41    46    51    65    70    79    89    94    99    125
       187   261   371   531   771   913   998   1086  1606  1671  1794  1856  1907
table.h:    +148   155   159   174   177



HeccerAddressAggregator

addressing-aggregator1.c:      1023  1025  1027
addressing.c:     *116   644
addressing.h:     +45
swiggable_heccer_wrap.c:       1865



HeccerAddressCompartmentSerial2Intermediary

addressing.c:     +34   *268   547



HeccerAddressCompartmentVariable

addressing-purk-test-axon.c:   979
addressing.c:     *187   676
addressing.h:     +53
hh1.c:       507
perfectclamp-passive1.c:       127
perfectclamp-passive10-2.c:    741
perfectclamp-passive10.c:      741
spiker1.c:   606
spiker2.c:   1200
spiker3.c:   957
springmass1.c:     259
springmass2.c:     259
springmass3.c:     252
springmass4.c:     252
swiggable_heccer_wrap.c:       1936
vclamp-passive.c:  138   139
vclamp-sodium.c:   363   364



HeccerAddressMechanismSerial2Intermediary

addressing.c:     *329   551



HeccerAddressMechanismVariable

addressing-purk-test-axon.c:   981   983   985   987   989   991   993
addressing.c:     *389   680
addressing.h:     +57
spiker1.c:   608
spiker2.c:   1202
spiker3.c:   959
swiggable_heccer_wrap.c:       1968



HeccerAddressSerial2Intermediary

addressing.c:     +41   *529   661



HeccerAddressTableIndex

addressing.c:     *583
addressing.h:     +61
swiggable_heccer_wrap.c:       2000



HeccerAddressVariable

addressing-aggregator1.c:      1013  1015  1017
addressing-purk-test-axon.c:   959   961   963   965   967   969   971   973
addressing.c:      77    592  *628
addressing.h:     +65
swiggable_heccer_wrap.c:       2032



HeccerAddressableSet

addressing.c:     *68
addressing.h:     +49
swiggable_heccer_wrap.c:       1900



HeccerAggregatorsCompile

heccer.c:   *85    355
heccer.h:   +260
swiggable_heccer_wrap.c:       6895



HeccerAggregatorsInitialize

heccer.c:   +29   *48    608



HeccerCanCompile

heccer.c:   *129   284
heccer.h:   +262
swiggable_heccer_wrap.c:       6922



HeccerChannelPersistentSteadyStateDualTauTabulate

table.c:    +30   *530   943



HeccerChannelPersistentSteadyStateTauTabulate

table.c:    +35   *770   951



HeccerChannelSteadyStateSteppedTauTabulate

table.c:    +40    967  *1085



HeccerCheckParameters

mechanism.c:      +35   *71    192   266   352   578   617   739   873   1025  1077
       1200  1329  1446



class HeccerCommandInfo

vm.c: *25    65    69    84    90    115   123+  124+  146   156   191   198   225
       470



HeccerCommandInfoLookup

vm.c: +157  *192   471



class HeccerCommandTable

vm.c: *49    81    112   132   158   167   193   431



HeccerCompartmentCompile

compartment.c:    *43
compartment.h:    +62
heccer.c:    341
swiggable_heccer_wrap.c:       3140



HeccerCompartmentDump

compartment.c:    *401
compartment.h:    +65
intermediary.c:    293
swiggable_heccer_wrap.c:       3175



HeccerCompartmentInitiate

compartment.c:    *477
compartment.h:    +68
heccer.c:    738
swiggable_heccer_wrap.c:       3202



HeccerCompartmentSolveCN

compartment.c:    *525
compartment.h:    +70
heccer.c:    634
swiggable_heccer_wrap.c:       3229



HeccerCompileP1

heccer.c:   *186
heccer.h:   +264
swiggable_heccer_wrap.c:       6949



HeccerCompileP2

cbc.c:      +26
heccer.c:   *269
heccer.h:   +266
main.c:      192
spiker2.c:   1424  1454  1484
spiker3.c:   1366  1396  1426
swiggable_heccer_wrap.c:       6976



HeccerCompileP3

cbc.c:      +30
heccer.c:   *326
heccer.h:   +268
main.c:      196
spiker2.c:   1428  1458  1488
spiker3.c:   1370  1400  1430
swiggable_heccer_wrap.c:       7003



HeccerConcentrationGateTabulate

swiggable_heccer_wrap.c:       20764
table.c:    *124   227
table.h:    +154



HeccerConstruct

heccer.c:   *29
heccer.h:   +52
heccer.h:   +52
swiggable_heccer_wrap.c:       21253



HeccerDiscretizeConcentrationGate

table.c:    +45   *186   927



HeccerDiscretizeGateConcept

table.c:    +50   *260   935



HeccerDump

heccer.c:    389  *392
heccer.h:   +272
main.c:      216   252   268
spiker2.c:   1520  1522  1524  1562  1564  1566  1582  1584  1586
spiker3.c:   1462  1464  1466  1504  1506  1508  1524  1526  1528
swiggable_heccer_wrap.c:       7065



HeccerDumpV

heccer.c:   *387
heccer.h:   +270
swiggable_heccer_wrap.c:       7030



HeccerError

addressing.c:      143   153   687
heccer.c:    146   156  *496
heccer.h:   +303
mechanism.c:       104   298   420   450   557   718   852   1004  1179  1308  1427
       1523  1544  2058  2080  2209  2475  2749  2993  3035  3092
mechanisms.c:      3330  3367  3638
minimumdegree.c:   396
segments.c:  203   251   355
swiggable_heccer_wrap.c:       7124
table.c:     282
vm.h:  694



HeccerEventGenerate

event.c:    *40
event.h:    +32
mechanism.c:       2987



HeccerEventReceive

event.c:    *88
event.h:    +34
mechanism.c:       2463



HeccerEventSet

event.c:    *143
event.h:    +36
spiker2.c:  .1002 .1026
spiker3.c:  .1136 .1160



HeccerGateConceptTabulate

swiggable_heccer_wrap.c:       20797
table.c:     337  *370
table.h:    +158



HeccerGetVersion

heccer.c:   *562
heccer.h:   +301
swiggable_heccer_wrap.c:       7086
version.c:   30



HeccerHecc

heccer.c:   *587   679



HeccerHeccs

heccer.c:   *660
heccer.h:   +307
main.c:      234
spiker2.c:   1542  1544  1546
spiker3.c:   1484  1486  1488
swiggable_heccer_wrap.c:       7154



HeccerIndexersDump

heccer.c:    458
indexers.c: *41
indexers.h: +56



HeccerInitiate

cbc.c:      +34
heccer.c:   *723
heccer.h:   +309
main.c:      200
spiker2.c:   1432  1462  1492
spiker3.c:   1374  1404  1434
swiggable_heccer_wrap.c:       7181



HeccerIntermediaryBuildIndex

intermediary.c:   *44
intermediary.h:   +80
mechanism.c:       158
swiggable_heccer_wrap.c:       5404



HeccerIntermediaryDump

heccer.c:    454
intermediary.c:   *267
intermediary.h:   +83
swiggable_heccer_wrap.c:       5439



HeccerIntermediaryLookup

intermediary.c:   *329
intermediary.h:   +87
mechanism.c:       311
swiggable_heccer_wrap.c:       5468



class HeccerInterval

swiggable_heccer_wrap.c:       19290+      19318+      19345+      19373+      19400+
       19428+      19455       19462+      19476+      19714+      19745       19757
table.h:    *38    72



HeccerMDFindFlow

minimumdegree.c:  +42   *262   513



HeccerMDFlowEnumerator

minimumdegree.c:  +29   *84    193   249   310



HeccerMDFlowEnumeratorB

minimumdegree.c:  +34    107  *173



HeccerMDFlowEnumeratorL

minimumdegree.c:  +39    157  *208



HeccerMDStructuralyze

minimumdegree.c:  +44   *355   506



HeccerMechanismCompile

heccer.c:    345
mechanism.c:      *150
mechanism.h:      +842
swiggable_heccer_wrap.c:       18135



HeccerMechanismLink

heccer.c:    349
mechanism.c:      *1632
mechanism.h:      +844
swiggable_heccer_wrap.c:       18162



HeccerMechanismReadDoubleFile

mechanism.c:      +42    443  *2120



HeccerMechanismSolveCN

heccer.c:    628
mechanism.c:      *2266
mechanism.h:      +846
swiggable_heccer_wrap.c:       18189



HeccerMechanismSort

heccer.c:    295
mechanism.c:      *3135
mechanism.h:      +848
swiggable_heccer_wrap.c:       18216



HeccerMinimumDegree

heccer.c:    291
minimumdegree.c:  *493
minimumdegree.h:  +56



HeccerMinimumDegreeDump

indexers.c:  50
minimumdegree.c:  *544
minimumdegree.h:  +59



HeccerNeurospacesMechanisms2MathComponents

heccer.c:   +135
mechanisms.c:     *4006
mechanisms.h:     +23



HeccerNeurospacesSegments2Compartments

heccer.c:    125
segments.c: *394
segments.h: +23



HeccerNew

cbc.c:      *10
heccer.c:   *773   903
heccer.h:   +312
spiker1.c:   624
spiker2.c:   1215  1217  1219
spiker3.c:   1301  1303  1305
swiggable_heccer_wrap.c:       7223



HeccerNewP1

heccer.c:    782  *820
heccer.h:   +319
swiggable_heccer_wrap.c:       7270



HeccerNewP2

cbc.c:      +22
heccer.c:   *899
heccer.h:   +327
main.c:      163
spiker2.c:   1371  1384  1397
spiker3.c:   1313  1326  1339
swiggable_heccer_wrap.c:       7300



class HeccerOptions

heccer.h:   *47    158
swiggable_heccer_wrap.c:       5482+       5509+       5536+       5563+       5590+
       5618+       5645+       5673+       5700+       5727+       5754+       5782+
       5809+       5837+       5864+       5891+       5918+       5945+       5972
       5979+       5993+       6193+       6224  6236



class HeccerTableApproximationOptions

swiggable_heccer_wrap.c:       19501+      19528+      19555       19562+      19576+
       19772+      19803       19815
table.h:    *54    78



HeccerTableDump

table.c:    +54   *1339  1534



HeccerTableInterpolate

swiggable_heccer_wrap.c:       20869
table.c:     632   724   875   1202  1301 *1408
table.h:    +166



HeccerTablesDump

heccer.c:    462
swiggable_heccer_wrap.c:       20832
table.c:    *1515
table.h:    +162



HeccerTabulateAny

mechanism.c:       486   657   779   793   913   927   1114  1237  1366
swiggable_heccer_wrap.c:       20904
table.c:    *912
table.h:    +173



HeccerTabulateSpringMass

table.c:    +79    959  *998



class HeccerTabulatedGate

mechanism.c:       2651
mechanism.h:       336   786
swiggable_heccer_wrap.c:       1192  1820  1833  11444+      11475       11487
       17423+      17454       17466       19601+      19632+      19659+      19686+
       19713+      19744+      19771+      19802+      19829+      19856+      19883+
       19914+      19941+      19972+      19999       20006+      20020+      20424
       20443+      20444       20458       20470+
table.c:     55    60    100   135   381   573   665   813   1128  1237  1340  1567
       1627  1678  1908  1910
table.h:    *62    122



HeccerTabulatedGateCompareParameters

table.c:    +59   *1566  1631



HeccerTabulatedGateLookup

table.c:    +64    208   318   552   646   792   1107  1216 *1605



HeccerTabulatedGateNew

table.c:    +69    214   324   558   652   798   1113  1222 *1670



HeccerTabulatedGateRegister

swiggable_heccer_wrap.c:       20937
table.h:    +177



HeccerTabulatedGateStore

table.c:    +98    294  *1906



class HeccerTabulatedSpringMass

mechanism.c:       2405
swiggable_heccer_wrap.c:       20045+      20076+      20103+      20130+      20157+
       20185+      20212+      20240+      20267+      20295+      20322+      20350+
       20377       20384+      20398+      20585       20604+      20605       20619
       20631+
table.c:     84    1032  1755  1815  1858
table.h:    *94    138



HeccerTabulatedSpringMassCompareParameters

table.c:    +83   *1754  1819



HeccerTabulatedSpringMassLookup

table.c:    +88    1013 *1793



HeccerTabulatedSpringMassNew

table.c:    +93    1019 *1855



HeccerVMDump

heccer.c:    466
vm.c: *272
vm.h: +1030



HeccerVMDumpOperators

vm.c: +162   296   318  *426



HvNAME

swiggable_heccer_wrap.c:      +730



hctCops

vm.c: *81   .296



hctMops

vm.c: *112  .318



class hsolve_list

hines_list.h:     +45   *57



class hsolve_list_element

hines_list.h:     +43   *48    52    53    63    67    71



htg_get

swiggable_heccer_wrap.c:      *1192  1833



hv_store_ent

swiggable_heccer_wrap.c:      +758



hypot

mathcalls.h:      +163



hypotf

mathcalls.h:      +163



hypotl

mathcalls.h:      +163



hblkhd
    
  s mallinfo		(1)

malloc.h:   *162



hblks
    
  s mallinfo		(1)

malloc.h:   *161



hi
    
  s HeccerTabulatedGate		(56)

mechanism.c:       2681+
mechanisms.c:     ,389  ,390  ,391   446   447   448  ,669  ,670  ,671  ,712  ,713
      ,714   769   770   771   910   911   912  ,1072 ,1073 ,1074  1136  1137  1138
swiggable_heccer_wrap.c:      ,19731      .19757
table.c:     139   146   385   392   583+  592   675+  684   821+  830   1136+
       1145  1245+       1254  1348  1349  1350 ,1711 ,1712 ,1713+
table.h:    *72



ho
    
  s Heccer		(87)

compartment.c:     55
heccer.c:    422   424   426   428   430   432   434  ,856  ,862  ,863  ,865  ,866
      ,868  ,870
heccer.h:   *158
main.c:     ,174  ,176  ,184  ,186  ,188
mechanism.c:       174   530   542   691   703   825   837   977   989   1152  1164
       1281  1293  1400  1412  1942
mechanisms.c:      2391  3194  3226
minimumdegree.c:   103
spiker2.c:  ,1408 ,1410 ,1418 ,1420 ,1438 ,1440 ,1448 ,1450 ,1468 ,1470 ,1478 ,1480
spiker3.c:  ,1350 ,1352 ,1360 ,1362 ,1380 ,1382 ,1390 ,1392 ,1410 ,1412 ,1420 ,1422
swiggable_heccer_wrap.c:      ,6210 .6236
table.c:     202   203   204   312   313   314   546   547   548   577   669   786
       787   788   817   1101  1102  1103  1132  1241



hslClasses
    
  s AlgorithmSet		(1)

algorithmset.h:   *40



hslDependencyFiles
    
  s DefinedSymbols		(1)

defsym.h:   *39



hslFiles
    
  s Symbols		(1)

symbols.h:  *60



hslHeader
    
  s HSolveListList		(1)

hines_listlist.h: *33



hslInstances
    
  s AlgorithmSet		(1)

algorithmset.h:   *48



hslList
    
  s HSolveListListElement		(1)

hines_listlist.h: *45



hslPrivateModels
    
  s DefinedSymbols		(1)

defsym.h:   *50



hslPublicModels
    
  s DefinedSymbols		(1)

defsym.h:   *56



hsle
    
x s symtab_AlgorithmSymbol		(3)
    
x s symtab_IOList		(11)
hsle of symtab_AlgorithmSymbol

algorithmsymbol.h:      *135  .302  .319
hsle of symtab_IOList

biocomp.h:  .441  .454  .503  ,508   509  ,512   513  .561  .563  .565
iol.h:      *50



hsleLink
    
x s AlgorithmClass		(1)
    
x s AlgorithmInstance		(1)
    
x s HSolveListListElement		(1)
    
x s ImportedFile		(1)
    
x s symtab_HSolveListElement		(1)
hsleLink of AlgorithmClass

algorithmclass.h: *92
hsleLink of AlgorithmInstance

algorithminstance.h:    *105
hsleLink of HSolveListListElement

hines_listlist.h: *41
hsleLink of ImportedFile

importedfile.h:   *39
hsleLink of symtab_HSolveListElement

symboltable.h:    *122



htao
    
  s HeccerTabulatedGate		(5)

swiggable_heccer_wrap.c:      ,19789      .19815
table.c:     1355 ,1723
table.h:    *78



htg
    
x s ConcentrationActivator		(14)
    
x s GateConcept		(47)
htg of ConcentrationActivator

mechanism.h:      *786
mechanisms.c:     ,710  ,712  ,713  ,714  ,718   908   910   911   912   914   918
swiggable_heccer_wrap.c:      ,17440      .17466
htg of GateConcept

mechanism.h:      *336
mechanisms.c:     ,387  ,389  ,390  ,391  ,395   444   446   447   448   450   454
      ,480  ,484  ,667  ,669  ,670  ,671  ,675   767   769   770   771   773   777
      ,803  ,807  ,1070 ,1072 ,1073 ,1074 ,1078  1134  1136  1137  1138  1140  1144
      ,1171 ,1175
swiggable_heccer_wrap.c:      ,11461      .11487
table.c:     276   277   279   280  .294