macro CACHEREGISTRY_H

cacheregistry.h:  *23

macro CHARCLASS_NAME_MAX

posix2_lim.h:     *85

macro CHAR_BIT

limits.h:   *18

macro CHAR_MAX

limits.h:   *53

macro CHAR_MIN

limits.h:   *51

macro CHILD_MAX

limits.h:   *8

macro CLK_TCK

time.h:     *41

macro CLOCKS_PER_SEC

time.h:     *34

macro CLOCK_MONOTONIC

time.h:     *48

macro CLOCK_PROCESS_CPUTIME_ID

time.h:     *50

macro CLOCK_REALTIME

time.h:     *46

macro CLOCK_THREAD_CPUTIME_ID

time.h:     *52

macro COLL_WEIGHTS_MAX

posix2_lim.h:     *76

macro COUNT_BIOLEVEL

biolevel.h: *57

macro COUNT_BIOLEVELGROUP

biolevel.h: *164

class CacheRegistry

cacheregistry.h:  +28    34    38    42   *75
neurospaces.h:     153

CacheRegistryCalloc

cacheregistry.h:  +35

CacheRegistryLookup

cacheregistry.h:  +38

CacheRegistryRegisterCache

cacheregistry.h:  +41

class Callout

callout.h:  +85    89   *97
callout1.c:  99    167
calloutInjector.c:       114   182
intermediary.c:    97+
mechanism.c:       329+  2358+
swiggable_heccer_wrap.c:       2303+       2334+       2361+       2392+       2419+
       2450+       2477+       2508+       2535+       2566+       2593  2600+
       2614+
vm.h:  408

class ChannelAct

addressing-aggregator1.c:      551
addressing-purk-test-axon.c:   519
hh1.c:       301   492+
intermediary.c:    136+
mathcomponent.c:   29+
mechanism.c:       611+
mechanism.h:      *392
mechanisms.c:      351+  2500+       3698+
spiker1.c:   94    576+
spiker2.c:   101   1159+
spiker3.c:   101   930+
swiggable_heccer_wrap.c:       12143+      12174+      12201+      12229+      12256+
       12283+      12310+      12338+      12365+      12392+      12419+      12450+
       12477       12484+      12498+
table-kdr2.c:      82
table-nap.c:       81

class ChannelActConc

intermediary.c:    162+
mathcomponent.c:   30+
mechanism.c:       867+
mechanism.h:      *805
mechanisms.c:      629+  2592+       3890+
pool1-feedback1.c:       330   540+
pool1-feedback2.c:       330   548+
swiggable_heccer_wrap.c:       17684+      17715+      17742+      17770+      17797+
       17824+      17851+      17879+      17906+      17933+      17960+      17991+
       18018+      18049+      18076       18083+      18097+
table-k2.c:  81
table-kc.c:  81

class ChannelActInact

addressing-aggregator1.c:      113   692
addressing-purk-test-axon.c:   103   649
channel1-nernst1.c:      92    421+
channel2-nernst1.c:      92    298   629+  633+
channel2-nernst2.c:      92    326   659+  667+
doublea-aggregator.c:    180   803+  811+
hh1.c:       95    488+
intermediary.c:    149+
mathcomponent.c:   31+
mechanism.c:       733+
mechanism.h:      *359
mechanisms.c:      1030+       2512+       3730+
pool1-contributors2.c:   91    297   598+  602+
pool1-feedback1.c:       87    548+
pool1-feedback2.c:       87    540+
pool1-nernst.c:    91    420+
pool1.c:     91    390+
pool2.c:     140   683+  691+
singlea-naf-current.c:   86
singlea-naf.c:     87
singlea-naf2-aggregator.c:     110   338   620+  624+
spiker1.c:   215   580+
spiker2.c:   231   1163+
spiker3.c:   231   934+
swiggable_heccer_wrap.c:       11705+      11736+      11763+      11791+      11818+
       11845+      11872+      11900+      11927+      11954+      11981+      12012+
       12039+      12070+      12097       12104+      12118+
table-cap.c:       81
table-cat.c:       81
table-ka.c:  81
table-naf.c:       81
vclamp-sodium.c:   89

class ChannelPersistentSteadyStateDualTau

intermediary.c:    188+
mathcomponent.c:   32+
mechanism.c:       1194+
mechanism.h:      *450
mechanisms.c:      1300  1301  2524+       3762+
swiggable_heccer_wrap.c:       12917+      12948+      12975+      13003+      13030+
       13057+      13084+      13112+      13139+      13166+      13193+      13220+
       13247+      13274+      13301+      13328+      13355+      13382+      13409+
       13437+      13464+      13492+      13519+      13550+      13577+      13608+
       13635       13642+      13656+
table-kh.c:  82
table.c:     31    531   941+

class ChannelPersistentSteadyStateTau

intermediary.c:    201+
mathcomponent.c:   33+
mechanism.c:       1323+
mechanism.h:      *502
mechanisms.c:      1485  1486  2536+       3794+
swiggable_heccer_wrap.c:       13681+      13712+      13739+      13767+      13794+
       13821+      13848+      13876+      13903+      13930+      13957+      13984+
       14011+      14038+      14065+      14093+      14120+      14147       14154+
       14168+
table-dual-km.c:   132
table-km.c:  82
table.c:     36    771   949+

typedef ChannelPersistentSteadyStateTau_parameters

swiggable_heccer_wrap.c:      *1293  14121       14133       14193+      14220+
       14247       14254+      14268+

typedef ChannelPersistentSteadyStateTau_parameters_ss

swiggable_heccer_wrap.c:      *1347  14221       14233       14559+      14587+
       14614+      14642+      14669+      14697+      14724+      14752+      14779+
       14807+      14834+      14862+      14889+      14917+      14944       14951+
       14965+

typedef ChannelPersistentSteadyStateTau_parameters_tc

swiggable_heccer_wrap.c:      *1314  14194       14206       14293+      14321+
       14348+      14376+      14403+      14431+      14458+      14486+      14513
       14520+      14534+

class ChannelSpringMass

intermediary.c:    110+
mathcomponent.c:   34+
mechanism.c:       346+
mechanism.h:      *44
mechanisms.c:      1719  1720  2560+       3858+
spiker2.c:   586   766
spiker3.c:   586   766
springmass1.c:     126
springmass2.c:     126
springmass3.c:     119
springmass4.c:     119
swiggable_heccer_wrap.c:       8338+       8369+       8396+       8424+       8451+
       8478+       8505+       8533+       8560+       8587+       8614+       8642+
       8669+       8697+       8724+       8752+       8779+       8806+       8833+
       8864+       8891+       8926+       8957+       8988+       9015  9022+
       9036+
table.c:     79    957+  998

class ChannelSteadyStateSteppedTau

addressing-aggregator1.c:      341
addressing-purk-test-axon.c:   320
intermediary.c:    175+
mathcomponent.c:   35+
mechanism.c:       1071+
mechanism.h:      *699
mechanisms.c:      1884  1885  2548+       3826+
swiggable_heccer_wrap.c:       16281+      16312+      16339+      16367+      16394+
       16421+      16448+      16476+      16503+      16530+      16557+      16584+
       16611+      16638+      16665+      16692+      16719+      16746+      16773+
       16801+      16828+      16856+      16883+      16914+      16941+      16972+
       16999       17006+      17020+
table-dual-kdr.c:  132
table-kdr.c:       82
table.c:     41    965+  1086

class Compartment

addressing-aggregator1.c:      43
addressing-purk-test-axon.c:   44
addressing.c:      283
c1c2p1.c:    23
c1c2p2.c:    23
callout1.c:  26
calloutInjector.c:       26
channel1-nernst1.c:      40
channel2-nernst1.c:      40
channel2-nernst2.c:      40
check-compartment.c:     23
compartment.c:     402
compartment.h:    *31    66
doublea-aggregator.c:    38
doublep.c:   23
fork3p.c:    23
fork4p1.c:   23
fork4p2.c:   23
fork4p3.c:   23
hh1.c:       43
intermediary.c:    285
intermediary.h:    50
minimumdegree.c:   381
perfectclamp-passive1.c:       37
perfectclamp-passive10-2.c:    37
perfectclamp-passive10.c:      37
pool1-contributors2.c:   39
pool1-feedback1.c:       37
pool1-feedback2.c:       37
pool1-nernst.c:    39
pool1.c:     39
pool2.c:     38
segments.c:  269+  319   335
singlea-naf-current.c:   34
singlea-naf.c:     35
singlea-naf2-aggregator.c:     38
singlep.c:   27
spiker1.c:   42
spiker2.c:   40    525   705
spiker3.c:   40    525   705
springmass1.c:     33
springmass2.c:     33
springmass3.c:     33
springmass4.c:     33
swiggable_heccer_wrap.c:       1173  1175+       1177  1181+       1185+       1709
       1717  1731+       1756+       1758+       1789+       1791  1804  2639+
       2670+       2697+       2724+       2751+       2779+       2806+       2834+
       2861+       2889+       2916+       2944+       2971+       2999+       3026+
       3054+       3081  3088+       3102+       3154+       5064+       5095  5107
table-cap.c:       31
table-cat.c:       31
table-dual-kdr.c:  30
table-dual-km.c:   30
table-k2.c:  31
table-ka.c:  29
table-kc.c:  31
table-kdr.c:       30
table-kdr2.c:      30
table-kh.c:  30
table-km.c:  30
table-naf.c:       29
table-nap.c:       29
tensizesp.c:       23
triplep.c:   23
vclamp-passive.c:  37
vclamp-sodium.c:   37

macro CompileTimeTestAttachment

attachment.h:     *35    48    59

macro CompileTimeTestD3Type

positionD3.h:     *46

macro CompileTimeTestDefinedSymbols

defsym.h:   *66

macro CompileTimeTestDouble

double.h:   *29

macro CompileTimeTestFunction

function.h: *49    84

macro CompileTimeTestHSolveList

hines_list.h:     *80

macro CompileTimeTestHSolveListElement

hines_list.h:     *91

macro CompileTimeTestHSolveListList

hines_listlist.h: *54

macro CompileTimeTestHSolveListListElement

hines_listlist.h: *65

macro CompileTimeTestIOList

iol.h:      *66

macro CompileTimeTestIdin

idin.h:     *136

macro CompileTimeTestImportedFile

importedfile.h:   *65

macro CompileTimeTestInputOutput

iocontainer.h:    *53

macro CompileTimeTestPSymbolStack

psymbolstack.h:   *145   205   216   238

macro CompileTimeTestParContainer

parcontainer.h:   *63    98

macro CompileTimeTestParameter

function.h: *60
parcontainer.h:   *52

macro CompileTimeTestParserContext

parsersupport.h:  *200   213

macro CompileTimeTestPidinStack

pidinstack.h:     *192   222   233

macro CompileTimeTestSymbol

symbolvirtual_protos.h: *57

typedef ComponentInspector

heccer.c:    216   220
service.h:  *30    46    50

class ConcentrationActivator

mechanism.h:      *768   800
swiggable_heccer_wrap.c:       17201+      17229+      17256+      17283+      17310+
       17337+      17364+      17395+      17422+      17453+      17480       17487+
       17501+      17581+      17612       17624       20745+
table.c:     46    125   187   925+
table.h:    +146   155

ConnectionSource2Target

mechanisms.c:     +145  *204   3702  3734  3766  3798  3830  3862  3894

class ConstantNernst

mechanism.h:      *162
swiggable_heccer_wrap.c:       9446+       9477+       9504+       9532+       9559+
       9587+       9614+       9642+       9669  9676+       9690+

class CoreRoot

treespacetraversal.h:   +107   171   223

caK

hh1.c:      *301   480   494

caKdr

spiker1.c:  *94    564   578
table-kdr2.c:     *82   .216

caKdrSource

spiker2.c:  *101   1147  1161
spiker3.c:  *101   918   932

caNaP

addressing-aggregator1.c:     *551   984  .998
addressing-purk-test-axon.c:  *519   930  .944
table-nap.c:      *81   .215

cacK2

table-k2.c: *81   .248

cacKC

pool1-feedback1.c:      *330   532   542
pool1-feedback2.c:      *330   532   550
table-kc.c: *81   .248

typedef caddr_t

types.h:    *117

caiCaP

channel2-nernst1.c:     *298   617   635
channel2-nernst2.c:     *326   645   669
pool1-contributors2.c:  *91    586   604
table-cap.c:      *81   .302

caiCaT

addressing-aggregator1.c:     *113   980  .996
addressing-purk-test-axon.c:  *103   926  .942
channel1-nernst1.c:     *92    409   423
channel2-nernst1.c:     *92    615   631
channel2-nernst2.c:     *92    643   661
pool1-contributors2.c:  *297   588   600
pool1-feedback1.c:      *87    528   550
pool1-feedback2.c:      *87    528   542
pool1-nernst.c:   *91    408   422
pool1.c:    *91    380   392
table-cat.c:      *81   .302

caiKA

table-ka.c: *81   .302

caiNa

hh1.c:      *95    478   490

caiNaF

addressing-aggregator1.c:     *692   986  .999
addressing-purk-test-axon.c:  *649   932  .945
singlea-naf-current.c:  *86   .307
singlea-naf.c:    *87   .308
spiker1.c:  *215   566   582
table-naf.c:      *81   .302
vclamp-sodium.c:  *89   .310

caiNaF1

singlea-naf2-aggregator.c:    *110   610   622

caiNaF2

singlea-naf2-aggregator.c:    *338   612   626

caiNaFSource

spiker2.c:  *231   1149  1165
spiker3.c:  *231   920   936

callSoma

callout1.c: *99   .140
calloutInjector.c:      *114  .155

calloc

addressing-aggregator1.c:      992
addressing-purk-test-axon.c:   938
channel1-nernst1.c:      417
channel2-nernst1.c:      625
channel2-nernst2.c:      655
compartment.c:     85    349   356   366   370
doublea-aggregator.c:    799
eventdistributor.c:      326   331   422   685   696
heccer.c:    100   831
heccer.c:    59    62
hh1.c:       484
intermediary.c:    66
malloc.h:   +121
mathcomponent.c:   101
mechanism.c:       1562  1566  1572  1580  1584  1596  1602  2140
mechanisms.c:      450   773   914   1140  3485  3491  3516  3549
minimumdegree.c:   272   276   367   369   439
output.c:    198   207   220
perfectclamp.c:    168   177   224
pool1-contributors2.c:   594
pool1-feedback1.c:       536
pool1-feedback2.c:       536
pool1-nernst.c:    416
pool1.c:     386
pool2.c:     679
segments.c:  269   382
singlea-naf2-aggregator.c:     616
spiker1.c:   572
spiker2.c:   1155
spiker3.c:   926
stdlib.h:   +586
swiggable_heccer_wrap.c:       2108  2264  2600  3088  3474  3686  3848  4174  4399
       4561  5352  5979  6843  7483  7811  7965  8299  9022  9407  9676  9999  10322
       10645       11075       11237       11508       11666       12104       12484
       12612       12878       13642       14154       14254       14520       14951
       15088       15188       15399       15720       15820       16031       16242
       17006       17162       17487       17645       18083       18527       19077
       19462       19562       20006       20384       20545       20706       21186
table.c:     585   586   677   678   823   824   1138  1139  1247  1248  1718  1719
vclamp.c:    165   174

cbrt

mathcalls.h:      +170

cbrtf

mathcalls.h:      +170

cbrtl

mathcalls.h:      +170

ceil

mathcalls.h:      +179

ceilf

mathcalls.h:      +179

ceill

mathcalls.h:      +179

cellsolver_getmathcomponents

mechanisms.c:     +195  *3400 .4010

cellsolver_getsegments

segments.c: +37   *219  .398

cellsolver_linkmathcomponents

mechanisms.c:     +197   3614 *3663

cellsolver_linksegments

segments.c: +39    283  *300

cellsolver_setupcomp2mech

segments.c: +41    287  *376

cfree

malloc.h:   +134
stdlib.h:   +602

chdir

unistd.h:   +434

chown

unistd.h:   +418

chroot

unistd.h:   +856

clearenv

stdlib.h:   +682

clearerr

stdio.h:    +720

clearerr_unlocked

stdio.h:    +729

clock

time.h:     +181

clock_getres

time.h:     +329

clock_gettime

time.h:     +332

clock_settime

time.h:     +335

typedef clock_t

time.h:     *60    181

typedef clockid_t

time.h:     *92    329   332   335   353

close

unistd.h:   +305

comp

c1c2p1.c:   *23   .137
c1c2p2.c:   *23   .137
channel1-nernst1.c:     *40   .393
channel2-nernst1.c:     *40   .599
channel2-nernst2.c:     *40   .627
check-compartment.c:    *23   .700
fork3p.c:   *23   .186
fork4p1.c:  *23   .235
fork4p2.c:  *23   .235
fork4p3.c:  *23   .235
perfectclamp-passive10-2.c:   *37   .714
perfectclamp-passive10.c:     *37   .714
pool1-contributors2.c:  *39   .570
pool1-feedback1.c:      *37   .512
pool1-feedback2.c:      *37   .512
pool1-nernst.c:   *39   .392
table-cap.c:      *31   .317
table-cat.c:      *31   .317
table-k2.c: *31   .263
table-kc.c: *31   .263
tensizesp.c:      *23   .700
triplep.c:  *23   .186

compSoma

addressing-aggregator1.c:     *43   .948
addressing-purk-test-axon.c:  *44   .894
callout1.c: *26   .155
calloutInjector.c:      *26   .170
hh1.c:      *43   .449
perfectclamp-passive1.c:      *37   .100
pool1.c:    *39   .364
singlea-naf-current.c:  *34   .322
singlea-naf.c:    *35   .323
singlea-naf2-aggregator.c:    *38   .594
singlep.c:  *27   .90
spiker1.c:  *42   .488
table-ka.c: *29   .317
table-kdr.c:      *30   .300
table-kdr2.c:     *30   .231
table-kh.c: *30   .221
table-km.c: *30   .210
table-naf.c:      *29   .317
table-nap.c:      *29   .230
vclamp-passive.c: *37   .100
vclamp-sodium.c:  *37   .325

compSource

spiker2.c:  *40   .513
spiker3.c:  *40   .513

compTarget1

spiker2.c:  *525  .693
spiker3.c:  *525  .693

compTarget2

spiker2.c:  *705  .873
spiker3.c:  *705  .873

comp_array

swiggable_heccer_wrap.c:      *1173  1717

comp_destroy

swiggable_heccer_wrap.c:      *1177  1743

comp_get

swiggable_heccer_wrap.c:      *1185  1804

comp_set

swiggable_heccer_wrap.c:      *1181  1776

comparator

eventdistributor.c:     *943  .984

confstr

unistd.h:   +544

copysign

mathcalls.h:      +218

copysignf

mathcalls.h:      +218

copysignl

mathcalls.h:      +218

cos

mathcalls.h:      +64

cosf

mathcalls.h:      +64

cosh

mathcalls.h:      +73

coshf

mathcalls.h:      +73

coshl

mathcalls.h:      +73

cosl

mathcalls.h:      +64

croak

swiggable_heccer_wrap.c:      +1481 +1512 +1537 +1566 +1595 +1618 +1643 +1673 +1702
      +1725 +1750 +1783 +1812 +1841 +1873 +1912 +1944 +1976 +2008 +2040 +2068 +2095
      +2116 +2141 +2169 +2196 +2224 +2251 +2272 +2297 +2328 +2355 +2386 +2413 +2444
      +2471 +2502 +2529 +2560 +2587 +2608 +2633 +2664 +2691 +2718 +2745 +2773 +2800
      +2828 +2855 +2883 +2910 +2938 +2965 +2993 +3020 +3048 +3075 +3096 +3121 +3148
      +3183 +3210 +3237 +3268 +3295 +3322 +3349 +3380 +3407 +3434 +3461 +3482 +3507
      +3534 +3561 +3588 +3615 +3646 +3673 +3694 +3719 +3750 +3777 +3808 +3835 +3856
      +3881 +3912 +3939 +3966 +3993 +4021 +4048 +4076 +4103 +4134 +4161 +4182 +4207
      +4234 +4261 +4301 +4328 +4359 +4386 +4407 +4432 +4463 +4490 +4521 +4548 +4569
      +4594 +4629 +4658 +4681 +4710 +4737 +4766 +4798 +4830 +4862 +4889 +4916 +4945
      +4976 +5003 +5030 +5057 +5088 +5115 +5146 +5173 +5204 +5231 +5258 +5285 +5312
      +5339 +5360 +5385 +5412 +5447 +5476 +5503 +5530 +5557 +5584 +5612 +5639 +5667
      +5694 +5721 +5748 +5776 +5803 +5831 +5858 +5885 +5912 +5939 +5966 +5987 +6012
      +6047 +6078 +6105 +6132 +6159 +6186 +6217 +6244 +6272 +6299 +6327 +6354 +6385
      +6412 +6443 +6470 +6501 +6528 +6559 +6586 +6619 +6650 +6681 +6708 +6739 +6766
      +6799 +6830 +6851 +6876 +6903 +6930 +6957 +6984 +7011 +7038 +7073 +7098 +7132
      +7162 +7189 +7231 +7278 +7308 +7335 +7362 +7389 +7416 +7443 +7470 +7491 +7516
      +7543 +7570 +7601 +7628 +7659 +7686 +7713 +7740 +7771 +7798 +7819 +7844 +7871
      +7898 +7925 +7952 +7973 +7998 +8031 +8060 +8093 +8126 +8149 +8176 +8204 +8231
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csm

springmass1.c:    *126  .210
springmass2.c:    *126  .210
springmass3.c:    *119  .203
springmass4.c:    *119  .203

csmTarget1

spiker2.c:  *586  .678
spiker3.c:  *586  .678

csmTarget2

spiker2.c:  *766  .858
spiker3.c:  *766  .858

csstKH

table-kh.c: *82   .206

csstKM

table-km.c: *82   .195

csstKdr

addressing-aggregator1.c:     *341   982  .997
addressing-purk-test-axon.c:  *320   928  .943
table-kdr.c:      *82   .285

ctermid

stdio.h:    +779

ctime

time.h:     +254

ctime_r

time.h:     +266

ca

    
  s PoweredActivatorConcept		(28)

mechanism.c:      .927   936   947   951
mechanism.h:      *800
mechanisms.c:     ,682  ,696  ,710  ,712  ,713  ,714  ,718  ,891   908   910   911
       912   914   918  ,956  ,962  ,2619 ,2626  3907  3909 ,3911
swiggable_heccer_wrap.c:      ,17598      .17624

cast

    
  s swig_type_info		(13)

swiggable_heccer_wrap.c:      *130   215   218   223   225+ ,226   304   22501
       22502       22503      ,22505       22533

cast_initial

    
  s swig_module_info		(3)

swiggable_heccer_wrap.c:      *150  ,22459       22488

clientdata

    
x s swig_module_info		(1)
    
x s swig_type_info		(9)

clientdata of swig_module_info

swiggable_heccer_wrap.c:      *151

clientdata of swig_type_info

swiggable_heccer_wrap.c:      *131  ,306   311  ,22482+      22532       22536
       22537

converter

    
  s swig_cast_info		(5)

swiggable_heccer_wrap.c:      *137   253+  309   22535

currentelem

    
  s sglib_EventList_iterator		(3)

sglib.h:    *1299  1403 ,1427